fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudothermotoga_A hypogea DSM 11164

Genome identifier: GCF_000816145.1

NCBI assembly name: ASM81614v1

GTDB taxonomy: Bacteria, Thermotogota, Thermotogae, Thermotogales, DSM-5069, Pseudothermotoga_A, Pseudothermotoga_A hypogea

NCBI taxonomy: Bacteria, Thermotogota, Thermotogae, Thermotogales, Thermotogaceae, Pseudothermotoga, Pseudothermotoga hypogea

Scaffolds: 1

Genes: 2,157 Protein-coding: 2,093 RNAs: 52 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP007141.1 Pseudothermotoga hypogea DSM 11164 = NBRC 106472 strain DSM 11164 chromosome, complete genome 2,165,416

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory