fast.genomicscompare 6,575 genera of bacteria & archaea

 

Geoalkalibacter ferrihydriticus DSM 17813

Genome identifier: GCF_000820505.1

NCBI assembly name: ASM82050v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, Geoalkalibacteraceae, Geoalkalibacter, Geoalkalibacter ferrihydriticus

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Geoalkalibacteraceae, Geoalkalibacter, Geoalkalibacter ferrihydriticus

Scaffolds: 23

Genes: 3,496 Protein-coding: 3,414 RNAs: 55 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JWJD01000001.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold1, whole genome shotgun sequence 1,394,064
NZ_JWJD01000002.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold2, whole genome shotgun sequence 602,663
NZ_JWJD01000003.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold3, whole genome shotgun sequence 472,476
NZ_JWJD01000004.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold4, whole genome shotgun sequence 256,210
NZ_JWJD01000005.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold5, whole genome shotgun sequence 232,213
NZ_JWJD01000006.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold6, whole genome shotgun sequence 182,933
NZ_JWJD01000007.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold7, whole genome shotgun sequence 200,134
NZ_JWJD01000008.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold8, whole genome shotgun sequence 125,645
NZ_JWJD01000009.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold9, whole genome shotgun sequence 99,978
NZ_JWJD01000010.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold10, whole genome shotgun sequence 119,241
NZ_JWJD01000011.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold11, whole genome shotgun sequence 70,567
NZ_JWJD01000012.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold12, whole genome shotgun sequence 24,870
NZ_JWJD01000013.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold13, whole genome shotgun sequence 15,954
NZ_JWJD01000014.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold14, whole genome shotgun sequence 16,091
NZ_JWJD01000015.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold15, whole genome shotgun sequence 8,282
NZ_JWJD01000016.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold16, whole genome shotgun sequence 7,602
NZ_JWJD01000017.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold17, whole genome shotgun sequence 2,775
NZ_JWJD01000018.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold18, whole genome shotgun sequence 3,017
NZ_JWJD01000019.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold19, whole genome shotgun sequence 1,873
NZ_JWJD01000020.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold20, whole genome shotgun sequence 815
NZ_JWJD01000021.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold21, whole genome shotgun sequence 1,429
NZ_JWJD01000022.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold22, whole genome shotgun sequence 584
NZ_JWJD01000023.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold23, whole genome shotgun sequence 276

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory