fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ruthenibacterium lactatiformans 585-1

Genome identifier: GCF_000949455.1

NCBI assembly name: ASM94945v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Ruthenibacterium, Ruthenibacterium lactatiformans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruthenibacterium, Ruthenibacterium lactatiformans

Scaffolds: 108

Genes: 4,020 Protein-coding: 3,874 RNAs: 57 pseudogenes: 89

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JXXK01000001.1 Ruthenibacterium lactatiformans strain 585-1 contig00001, whole genome shotgun sequence 406,627
NZ_JXXK01000002.1 Ruthenibacterium lactatiformans strain 585-1 contig00002, whole genome shotgun sequence 267,332
NZ_JXXK01000003.1 Ruthenibacterium lactatiformans strain 585-1 contig00003, whole genome shotgun sequence 174,195
NZ_JXXK01000004.1 Ruthenibacterium lactatiformans strain 585-1 contig00004, whole genome shotgun sequence 171,803
NZ_JXXK01000005.1 Ruthenibacterium lactatiformans strain 585-1 contig00005, whole genome shotgun sequence 164,027
NZ_JXXK01000006.1 Ruthenibacterium lactatiformans strain 585-1 contig00006, whole genome shotgun sequence 152,040
NZ_JXXK01000007.1 Ruthenibacterium lactatiformans strain 585-1 contig00007, whole genome shotgun sequence 137,964
NZ_JXXK01000008.1 Ruthenibacterium lactatiformans strain 585-1 contig00008, whole genome shotgun sequence 130,246
NZ_JXXK01000009.1 Ruthenibacterium lactatiformans strain 585-1 contig00009, whole genome shotgun sequence 111,390
NZ_JXXK01000010.1 Ruthenibacterium lactatiformans strain 585-1 contig00010, whole genome shotgun sequence 109,079
NZ_JXXK01000011.1 Ruthenibacterium lactatiformans strain 585-1 contig00011, whole genome shotgun sequence 108,630
NZ_JXXK01000012.1 Ruthenibacterium lactatiformans strain 585-1 contig00012, whole genome shotgun sequence 102,066
NZ_JXXK01000013.1 Ruthenibacterium lactatiformans strain 585-1 contig00013, whole genome shotgun sequence 101,736
NZ_JXXK01000014.1 Ruthenibacterium lactatiformans strain 585-1 contig00014, whole genome shotgun sequence 98,398
NZ_JXXK01000015.1 Ruthenibacterium lactatiformans strain 585-1 contig00015, whole genome shotgun sequence 95,585
NZ_JXXK01000016.1 Ruthenibacterium lactatiformans strain 585-1 contig00016, whole genome shotgun sequence 85,568
NZ_JXXK01000017.1 Ruthenibacterium lactatiformans strain 585-1 contig00017, whole genome shotgun sequence 85,363
NZ_JXXK01000018.1 Ruthenibacterium lactatiformans strain 585-1 contig00018, whole genome shotgun sequence 84,228
NZ_JXXK01000019.1 Ruthenibacterium lactatiformans strain 585-1 contig00019, whole genome shotgun sequence 76,310
NZ_JXXK01000020.1 Ruthenibacterium lactatiformans strain 585-1 contig00020, whole genome shotgun sequence 68,530
NZ_JXXK01000021.1 Ruthenibacterium lactatiformans strain 585-1 contig00021, whole genome shotgun sequence 66,012
NZ_JXXK01000022.1 Ruthenibacterium lactatiformans strain 585-1 contig00022, whole genome shotgun sequence 64,242
NZ_JXXK01000023.1 Ruthenibacterium lactatiformans strain 585-1 contig00023, whole genome shotgun sequence 61,807
NZ_JXXK01000024.1 Ruthenibacterium lactatiformans strain 585-1 contig00024, whole genome shotgun sequence 60,010
NZ_JXXK01000025.1 Ruthenibacterium lactatiformans strain 585-1 contig00025, whole genome shotgun sequence 59,890
NZ_JXXK01000026.1 Ruthenibacterium lactatiformans strain 585-1 contig00026, whole genome shotgun sequence 54,362
NZ_JXXK01000027.1 Ruthenibacterium lactatiformans strain 585-1 contig00027, whole genome shotgun sequence 53,999
NZ_JXXK01000028.1 Ruthenibacterium lactatiformans strain 585-1 contig00028, whole genome shotgun sequence 49,058
NZ_JXXK01000029.1 Ruthenibacterium lactatiformans strain 585-1 contig00029, whole genome shotgun sequence 48,519
NZ_JXXK01000030.1 Ruthenibacterium lactatiformans strain 585-1 contig00030, whole genome shotgun sequence 45,059
NZ_JXXK01000031.1 Ruthenibacterium lactatiformans strain 585-1 contig00031, whole genome shotgun sequence 45,009
NZ_JXXK01000032.1 Ruthenibacterium lactatiformans strain 585-1 contig00032, whole genome shotgun sequence 42,205
NZ_JXXK01000033.1 Ruthenibacterium lactatiformans strain 585-1 contig00033, whole genome shotgun sequence 41,896
NZ_JXXK01000034.1 Ruthenibacterium lactatiformans strain 585-1 contig00034, whole genome shotgun sequence 39,363
NZ_JXXK01000035.1 Ruthenibacterium lactatiformans strain 585-1 contig00035, whole genome shotgun sequence 37,745
NZ_JXXK01000036.1 Ruthenibacterium lactatiformans strain 585-1 contig00036, whole genome shotgun sequence 35,891
NZ_JXXK01000037.1 Ruthenibacterium lactatiformans strain 585-1 contig00037, whole genome shotgun sequence 34,085
NZ_JXXK01000038.1 Ruthenibacterium lactatiformans strain 585-1 contig00038, whole genome shotgun sequence 33,391
NZ_JXXK01000039.1 Ruthenibacterium lactatiformans strain 585-1 contig00039, whole genome shotgun sequence 30,379
NZ_JXXK01000040.1 Ruthenibacterium lactatiformans strain 585-1 contig00040, whole genome shotgun sequence 29,564
NZ_JXXK01000041.1 Ruthenibacterium lactatiformans strain 585-1 contig00041, whole genome shotgun sequence 26,802
NZ_JXXK01000042.1 Ruthenibacterium lactatiformans strain 585-1 contig00042, whole genome shotgun sequence 26,796
NZ_JXXK01000043.1 Ruthenibacterium lactatiformans strain 585-1 contig00043, whole genome shotgun sequence 24,611
NZ_JXXK01000044.1 Ruthenibacterium lactatiformans strain 585-1 contig00044, whole genome shotgun sequence 22,350
NZ_JXXK01000045.1 Ruthenibacterium lactatiformans strain 585-1 contig00045, whole genome shotgun sequence 18,822
NZ_JXXK01000046.1 Ruthenibacterium lactatiformans strain 585-1 contig00046, whole genome shotgun sequence 17,251
NZ_JXXK01000047.1 Ruthenibacterium lactatiformans strain 585-1 contig00047, whole genome shotgun sequence 17,081
NZ_JXXK01000048.1 Ruthenibacterium lactatiformans strain 585-1 contig00048, whole genome shotgun sequence 15,772
NZ_JXXK01000049.1 Ruthenibacterium lactatiformans strain 585-1 contig00049, whole genome shotgun sequence 15,433
NZ_JXXK01000050.1 Ruthenibacterium lactatiformans strain 585-1 contig00050, whole genome shotgun sequence 15,084
NZ_JXXK01000051.1 Ruthenibacterium lactatiformans strain 585-1 contig00051, whole genome shotgun sequence 14,417
NZ_JXXK01000052.1 Ruthenibacterium lactatiformans strain 585-1 contig00052, whole genome shotgun sequence 12,577
NZ_JXXK01000053.1 Ruthenibacterium lactatiformans strain 585-1 contig00053, whole genome shotgun sequence 12,117
NZ_JXXK01000054.1 Ruthenibacterium lactatiformans strain 585-1 contig00054, whole genome shotgun sequence 10,602
NZ_JXXK01000055.1 Ruthenibacterium lactatiformans strain 585-1 contig00055, whole genome shotgun sequence 10,340
NZ_JXXK01000056.1 Ruthenibacterium lactatiformans strain 585-1 contig00056, whole genome shotgun sequence 10,280
NZ_JXXK01000057.1 Ruthenibacterium lactatiformans strain 585-1 contig00057, whole genome shotgun sequence 9,738
NZ_JXXK01000058.1 Ruthenibacterium lactatiformans strain 585-1 contig00058, whole genome shotgun sequence 8,768
NZ_JXXK01000059.1 Ruthenibacterium lactatiformans strain 585-1 contig00059, whole genome shotgun sequence 8,765
NZ_JXXK01000060.1 Ruthenibacterium lactatiformans strain 585-1 contig00060, whole genome shotgun sequence 8,719
NZ_JXXK01000061.1 Ruthenibacterium lactatiformans strain 585-1 contig00061, whole genome shotgun sequence 8,645
NZ_JXXK01000062.1 Ruthenibacterium lactatiformans strain 585-1 contig00062, whole genome shotgun sequence 8,091
NZ_JXXK01000063.1 Ruthenibacterium lactatiformans strain 585-1 contig00063, whole genome shotgun sequence 7,844
NZ_JXXK01000064.1 Ruthenibacterium lactatiformans strain 585-1 contig00064, whole genome shotgun sequence 7,365
NZ_JXXK01000065.1 Ruthenibacterium lactatiformans strain 585-1 contig00065, whole genome shotgun sequence 7,075
NZ_JXXK01000066.1 Ruthenibacterium lactatiformans strain 585-1 contig00066, whole genome shotgun sequence 6,948
NZ_JXXK01000067.1 Ruthenibacterium lactatiformans strain 585-1 contig00067, whole genome shotgun sequence 5,839
NZ_JXXK01000068.1 Ruthenibacterium lactatiformans strain 585-1 contig00068, whole genome shotgun sequence 5,469
NZ_JXXK01000069.1 Ruthenibacterium lactatiformans strain 585-1 contig00069, whole genome shotgun sequence 5,397
NZ_JXXK01000070.1 Ruthenibacterium lactatiformans strain 585-1 contig00070, whole genome shotgun sequence 4,856
NZ_JXXK01000071.1 Ruthenibacterium lactatiformans strain 585-1 contig00071, whole genome shotgun sequence 4,138
NZ_JXXK01000072.1 Ruthenibacterium lactatiformans strain 585-1 contig00072, whole genome shotgun sequence 4,019
NZ_JXXK01000073.1 Ruthenibacterium lactatiformans strain 585-1 contig00073, whole genome shotgun sequence 4,000
NZ_JXXK01000074.1 Ruthenibacterium lactatiformans strain 585-1 contig00074, whole genome shotgun sequence 3,831
NZ_JXXK01000075.1 Ruthenibacterium lactatiformans strain 585-1 contig00075, whole genome shotgun sequence 3,804
NZ_JXXK01000076.1 Ruthenibacterium lactatiformans strain 585-1 contig00076, whole genome shotgun sequence 3,328
NZ_JXXK01000077.1 Ruthenibacterium lactatiformans strain 585-1 contig00077, whole genome shotgun sequence 3,122
NZ_JXXK01000078.1 Ruthenibacterium lactatiformans strain 585-1 contig00078, whole genome shotgun sequence 2,955
NZ_JXXK01000079.1 Ruthenibacterium lactatiformans strain 585-1 contig00079, whole genome shotgun sequence 2,889
NZ_JXXK01000080.1 Ruthenibacterium lactatiformans strain 585-1 contig00080, whole genome shotgun sequence 2,667
NZ_JXXK01000081.1 Ruthenibacterium lactatiformans strain 585-1 contig00081, whole genome shotgun sequence 2,557
NZ_JXXK01000082.1 Ruthenibacterium lactatiformans strain 585-1 contig00082, whole genome shotgun sequence 2,277
NZ_JXXK01000083.1 Ruthenibacterium lactatiformans strain 585-1 contig00083, whole genome shotgun sequence 2,245
NZ_JXXK01000084.1 Ruthenibacterium lactatiformans strain 585-1 contig00084, whole genome shotgun sequence 2,187
NZ_JXXK01000085.1 Ruthenibacterium lactatiformans strain 585-1 contig00085, whole genome shotgun sequence 2,080
NZ_JXXK01000086.1 Ruthenibacterium lactatiformans strain 585-1 contig00086, whole genome shotgun sequence 1,976
NZ_JXXK01000087.1 Ruthenibacterium lactatiformans strain 585-1 contig00087, whole genome shotgun sequence 1,851
NZ_JXXK01000088.1 Ruthenibacterium lactatiformans strain 585-1 contig00088, whole genome shotgun sequence 1,707
NZ_JXXK01000089.1 Ruthenibacterium lactatiformans strain 585-1 contig00089, whole genome shotgun sequence 1,609
NZ_JXXK01000090.1 Ruthenibacterium lactatiformans strain 585-1 contig00090, whole genome shotgun sequence 1,561
NZ_JXXK01000091.1 Ruthenibacterium lactatiformans strain 585-1 contig00091, whole genome shotgun sequence 1,552
NZ_JXXK01000092.1 Ruthenibacterium lactatiformans strain 585-1 contig00092, whole genome shotgun sequence 1,548
NZ_JXXK01000093.1 Ruthenibacterium lactatiformans strain 585-1 contig00093, whole genome shotgun sequence 1,528
NZ_JXXK01000094.1 Ruthenibacterium lactatiformans strain 585-1 contig00094, whole genome shotgun sequence 1,508
NZ_JXXK01000095.1 Ruthenibacterium lactatiformans strain 585-1 contig00095, whole genome shotgun sequence 1,440
NZ_JXXK01000096.1 Ruthenibacterium lactatiformans strain 585-1 contig00096, whole genome shotgun sequence 1,386
NZ_JXXK01000097.1 Ruthenibacterium lactatiformans strain 585-1 contig00097, whole genome shotgun sequence 1,318
NZ_JXXK01000098.1 Ruthenibacterium lactatiformans strain 585-1 contig00098, whole genome shotgun sequence 1,182
NZ_JXXK01000099.1 Ruthenibacterium lactatiformans strain 585-1 contig00099, whole genome shotgun sequence 1,094
NZ_JXXK01000100.1 Ruthenibacterium lactatiformans strain 585-1 contig00100, whole genome shotgun sequence 961
NZ_JXXK01000101.1 Ruthenibacterium lactatiformans strain 585-1 contig00101, whole genome shotgun sequence 809
NZ_JXXK01000102.1 Ruthenibacterium lactatiformans strain 585-1 contig00102, whole genome shotgun sequence 749
NZ_JXXK01000103.1 Ruthenibacterium lactatiformans strain 585-1 contig00103, whole genome shotgun sequence 736
NZ_JXXK01000104.1 Ruthenibacterium lactatiformans strain 585-1 contig00104, whole genome shotgun sequence 708
NZ_JXXK01000105.1 Ruthenibacterium lactatiformans strain 585-1 contig00105, whole genome shotgun sequence 621
NZ_JXXK01000106.1 Ruthenibacterium lactatiformans strain 585-1 contig00106, whole genome shotgun sequence 617
NZ_JXXK01000107.1 Ruthenibacterium lactatiformans strain 585-1 contig00107, whole genome shotgun sequence 552
NZ_JXXK01000108.1 Ruthenibacterium lactatiformans strain 585-1 contig00108, whole genome shotgun sequence 509

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory