fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_AB cylindrosporum DSM 605

Genome identifier: GCF_001047375.1

NCBI assembly name: ASM104737v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Caloramatoraceae, Clostridium_AB, Clostridium_AB cylindrosporum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium cylindrosporum

Scaffolds: 28

Genes: 2,708 Protein-coding: 2,613 RNAs: 81 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LFVU01000001.1 Clostridium cylindrosporum DSM 605 CLCY_8c, whole genome shotgun sequence 148,164
NZ_LFVU01000002.1 Clostridium cylindrosporum DSM 605 CLCY_6c, whole genome shotgun sequence 161,209
NZ_LFVU01000003.1 Clostridium cylindrosporum DSM 605 CLCY_7c, whole genome shotgun sequence 161,074
NZ_LFVU01000004.1 Clostridium cylindrosporum DSM 605 CLCY_5c, whole genome shotgun sequence 214,349
NZ_LFVU01000005.1 Clostridium cylindrosporum DSM 605 CLCY_11c, whole genome shotgun sequence 96,873
NZ_LFVU01000006.1 Clostridium cylindrosporum DSM 605 CLCY_9c, whole genome shotgun sequence 112,723
NZ_LFVU01000007.1 Clostridium cylindrosporum DSM 605 CLCY_10c, whole genome shotgun sequence 99,384
NZ_LFVU01000008.1 Clostridium cylindrosporum DSM 605 CLCY_12c, whole genome shotgun sequence 36,552
NZ_LFVU01000009.1 Clostridium cylindrosporum DSM 605 CLCY_14c, whole genome shotgun sequence 18,456
NZ_LFVU01000010.1 Clostridium cylindrosporum DSM 605 CLCY_15c, whole genome shotgun sequence 15,019
NZ_LFVU01000011.1 Clostridium cylindrosporum DSM 605 CLCY_13c, whole genome shotgun sequence 27,015
NZ_LFVU01000012.1 Clostridium cylindrosporum DSM 605 CLCY_18c, whole genome shotgun sequence 7,838
NZ_LFVU01000013.1 Clostridium cylindrosporum DSM 605 CLCY_19c, whole genome shotgun sequence 7,242
NZ_LFVU01000014.1 Clostridium cylindrosporum DSM 605 CLCY_20c, whole genome shotgun sequence 6,779
NZ_LFVU01000015.1 Clostridium cylindrosporum DSM 605 CLCY_21c, whole genome shotgun sequence 3,567
NZ_LFVU01000016.1 Clostridium cylindrosporum DSM 605 CLCY_23c, whole genome shotgun sequence 1,292
NZ_LFVU01000017.1 Clostridium cylindrosporum DSM 605 CLCY_24c, whole genome shotgun sequence 1,200
NZ_LFVU01000018.1 Clostridium cylindrosporum DSM 605 CLCY_26c, whole genome shotgun sequence 813
NZ_LFVU01000019.1 Clostridium cylindrosporum DSM 605 CLCY_29c, whole genome shotgun sequence 636
NZ_LFVU01000020.1 Clostridium cylindrosporum DSM 605 CLCY_16c, whole genome shotgun sequence 14,457
NZ_LFVU01000021.1 Clostridium cylindrosporum DSM 605 CLCY_31c, whole genome shotgun sequence 552
NZ_LFVU01000022.1 Clostridium cylindrosporum DSM 605 CLCY_30c, whole genome shotgun sequence 622
NZ_LFVU01000023.1 Clostridium cylindrosporum DSM 605 CLCY_17c, whole genome shotgun sequence 14,166
NZ_LFVU01000024.1 Clostridium cylindrosporum DSM 605 CLCY_4c, whole genome shotgun sequence 302,301
NZ_LFVU01000025.1 Clostridium cylindrosporum DSM 605 CLCY_22c, whole genome shotgun sequence 3,010
NZ_LFVU01000026.1 Clostridium cylindrosporum DSM 605 CLCY_3c, whole genome shotgun sequence 312,805
NZ_LFVU01000027.1 Clostridium cylindrosporum DSM 605 CLCY_2c, whole genome shotgun sequence 465,656
NZ_LFVU01000028.1 Clostridium cylindrosporum DSM 605 CLCY_1c, whole genome shotgun sequence 501,278

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory