fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nereida ignava CECT 5292

Genome identifier: GCF_001049735.1

NCBI assembly name: N.ignavaCECT5292_MIRA

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Nereida, Nereida ignava

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Nereida, Nereida ignava

Scaffolds: 69

Genes: 2,908 Protein-coding: 2,805 RNAs: 55 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CVPC01000001.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 45,104
NZ_CVPC01000002.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 415,758
NZ_CVPC01000003.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 331,413
NZ_CVPC01000004.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 150,214
NZ_CVPC01000005.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 474,497
NZ_CVPC01000006.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 194,369
NZ_CVPC01000007.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 68,064
NZ_CVPC01000008.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 86,806
NZ_CVPC01000009.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 147,214
NZ_CVPC01000010.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 96,175
NZ_CVPC01000011.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 119,345
NZ_CVPC01000012.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 24,644
NZ_CVPC01000013.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 164,399
NZ_CVPC01000014.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 7,909
NZ_CVPC01000015.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 41,813
NZ_CVPC01000016.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 87,831
NZ_CVPC01000017.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 16,335
NZ_CVPC01000018.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 20,400
NZ_CVPC01000019.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 7,070
NZ_CVPC01000020.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 15,477
NZ_CVPC01000021.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 21,318
NZ_CVPC01000022.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 80,004
NZ_CVPC01000023.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 30,846
NZ_CVPC01000024.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 12,265
NZ_CVPC01000025.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 13,232
NZ_CVPC01000026.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 5,781
NZ_CVPC01000027.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 16,125
NZ_CVPC01000028.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 18,017
NZ_CVPC01000029.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 17,584
NZ_CVPC01000030.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 20,875
NZ_CVPC01000031.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 4,290
NZ_CVPC01000032.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 7,663
NZ_CVPC01000033.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 9,675
NZ_CVPC01000034.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 7,504
NZ_CVPC01000035.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 8,811
NZ_CVPC01000036.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 11,063
NZ_CVPC01000037.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 3,971
NZ_CVPC01000038.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 5,291
NZ_CVPC01000039.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 5,783
NZ_CVPC01000040.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 6,155
NZ_CVPC01000041.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,843
NZ_CVPC01000042.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 4,067
NZ_CVPC01000043.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 5,216
NZ_CVPC01000044.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 3,086
NZ_CVPC01000045.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 3,697
NZ_CVPC01000046.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,835
NZ_CVPC01000047.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 3,297
NZ_CVPC01000048.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,322
NZ_CVPC01000049.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 3,210
NZ_CVPC01000050.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,688
NZ_CVPC01000051.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,366
NZ_CVPC01000052.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,071
NZ_CVPC01000053.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,176
NZ_CVPC01000054.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,074
NZ_CVPC01000055.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,553
NZ_CVPC01000056.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,718
NZ_CVPC01000057.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,538
NZ_CVPC01000058.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,293
NZ_CVPC01000059.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,800
NZ_CVPC01000060.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,334
NZ_CVPC01000061.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,939
NZ_CVPC01000062.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 6,065
NZ_CVPC01000063.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,182
NZ_CVPC01000064.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,638
NZ_CVPC01000065.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,485
NZ_CVPC01000066.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,128
NZ_CVPC01000067.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 2,001
NZ_CVPC01000068.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,597
NZ_CVPC01000069.1 Nereida ignava strain CECT 5292, whole genome shotgun sequence 1,040

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory