fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lentimicrobium saccharophilum TBC1

Genome identifier: GCF_001192835.1

NCBI assembly name: ASM119283v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Lentimicrobiaceae, Lentimicrobium, Lentimicrobium saccharophilum

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Lentimicrobiaceae, Lentimicrobium, Lentimicrobium saccharophilum

Scaffolds: 2

Genes: 3,378 Protein-coding: 3,312 RNAs: 51 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_DF968182.1 Lentimicrobium saccharophilum strain TBC1, whole genome shotgun sequence 3,114,282
NZ_DF968183.1 Lentimicrobium saccharophilum strain TBC1, whole genome shotgun sequence 1,400,125

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory