fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudaestuariivita atlantica 22II-S11-z3

Genome identifier: GCF_001205715.1

NCBI assembly name: ASM120571v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudaestuariivita, Pseudaestuariivita atlantica

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pseudaestuariivita, Pseudaestuariivita atlantica

Scaffolds: 56

Genes: 4,311 Protein-coding: 4,236 RNAs: 47 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AQQZ01000001.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig1, whole genome shotgun sequence 705,047
NZ_AQQZ01000002.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig2, whole genome shotgun sequence 630,337
NZ_AQQZ01000003.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig3, whole genome shotgun sequence 568,342
NZ_AQQZ01000004.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig4, whole genome shotgun sequence 541,814
NZ_AQQZ01000005.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig5, whole genome shotgun sequence 298,982
NZ_AQQZ01000006.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig6, whole genome shotgun sequence 272,056
NZ_AQQZ01000007.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig7, whole genome shotgun sequence 240,055
NZ_AQQZ01000008.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig8, whole genome shotgun sequence 232,061
NZ_AQQZ01000009.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig9, whole genome shotgun sequence 189,148
NZ_AQQZ01000010.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig10, whole genome shotgun sequence 51,499
NZ_AQQZ01000011.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig11, whole genome shotgun sequence 48,980
NZ_AQQZ01000012.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig12, whole genome shotgun sequence 39,166
NZ_AQQZ01000013.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig13, whole genome shotgun sequence 38,948
NZ_AQQZ01000014.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig14, whole genome shotgun sequence 38,459
NZ_AQQZ01000015.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig15, whole genome shotgun sequence 38,393
NZ_AQQZ01000016.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig16, whole genome shotgun sequence 31,496
NZ_AQQZ01000017.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig17, whole genome shotgun sequence 29,474
NZ_AQQZ01000018.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig18, whole genome shotgun sequence 29,163
NZ_AQQZ01000019.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig19, whole genome shotgun sequence 27,292
NZ_AQQZ01000020.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig20, whole genome shotgun sequence 24,621
NZ_AQQZ01000021.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig21, whole genome shotgun sequence 24,584
NZ_AQQZ01000022.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig22, whole genome shotgun sequence 24,503
NZ_AQQZ01000023.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig23, whole genome shotgun sequence 23,905
NZ_AQQZ01000024.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig24, whole genome shotgun sequence 21,764
NZ_AQQZ01000025.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig25, whole genome shotgun sequence 20,108
NZ_AQQZ01000026.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig26, whole genome shotgun sequence 19,418
NZ_AQQZ01000027.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig27, whole genome shotgun sequence 18,859
NZ_AQQZ01000028.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig28, whole genome shotgun sequence 15,910
NZ_AQQZ01000029.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig29, whole genome shotgun sequence 15,156
NZ_AQQZ01000030.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig30, whole genome shotgun sequence 12,167
NZ_AQQZ01000031.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig31, whole genome shotgun sequence 7,677
NZ_AQQZ01000032.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig32, whole genome shotgun sequence 6,956
NZ_AQQZ01000033.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig33, whole genome shotgun sequence 6,218
NZ_AQQZ01000034.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig34, whole genome shotgun sequence 5,929
NZ_AQQZ01000035.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig35, whole genome shotgun sequence 5,267
NZ_AQQZ01000036.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig36, whole genome shotgun sequence 4,923
NZ_AQQZ01000037.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig37, whole genome shotgun sequence 4,390
NZ_AQQZ01000038.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig38, whole genome shotgun sequence 4,114
NZ_AQQZ01000039.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig39, whole genome shotgun sequence 3,072
NZ_AQQZ01000040.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig40, whole genome shotgun sequence 2,968
NZ_AQQZ01000041.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig41, whole genome shotgun sequence 2,591
NZ_AQQZ01000042.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig42, whole genome shotgun sequence 2,569
NZ_AQQZ01000043.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig43, whole genome shotgun sequence 2,011
NZ_AQQZ01000044.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig44, whole genome shotgun sequence 1,563
NZ_AQQZ01000045.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig45, whole genome shotgun sequence 1,563
NZ_AQQZ01000046.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig46, whole genome shotgun sequence 1,465
NZ_AQQZ01000047.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig47, whole genome shotgun sequence 1,384
NZ_AQQZ01000048.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig48, whole genome shotgun sequence 969
NZ_AQQZ01000049.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig49, whole genome shotgun sequence 916
NZ_AQQZ01000050.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig50, whole genome shotgun sequence 811
NZ_AQQZ01000051.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig51, whole genome shotgun sequence 764
NZ_AQQZ01000052.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig52, whole genome shotgun sequence 736
NZ_AQQZ01000053.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig53, whole genome shotgun sequence 720
NZ_AQQZ01000054.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig54, whole genome shotgun sequence 485
NZ_AQQZ01000055.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig55, whole genome shotgun sequence 457
NZ_AQQZ01000056.1 Pseudaestuariivita atlantica strain 22II-S11-z3 contig56, whole genome shotgun sequence 417

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory