fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_F botulinum ATCC 25763

Genome identifier: GCF_001276985.1

NCBI assembly name: CBOT009-SEQ-1-ASM-1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_F, Clostridium_F botulinum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium botulinum

Scaffolds: 28

Genes: 3,702 Protein-coding: 3,522 RNAs: 112 pseudogenes: 68

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LHUL01000001.1 Clostridium botulinum strain ATCC 25763 contig_1, whole genome shotgun sequence 58,881
NZ_LHUL01000002.1 Clostridium botulinum strain ATCC 25763 contig_2, whole genome shotgun sequence 333
NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence 330,060
NZ_LHUL01000004.1 Clostridium botulinum strain ATCC 25763 contig_4, whole genome shotgun sequence 767,253
NZ_LHUL01000005.1 Clostridium botulinum strain ATCC 25763 contig_5, whole genome shotgun sequence 2,889
NZ_LHUL01000006.1 Clostridium botulinum strain ATCC 25763 contig_6, whole genome shotgun sequence 63,762
NZ_LHUL01000007.1 Clostridium botulinum strain ATCC 25763 contig_7, whole genome shotgun sequence 91,779
NZ_LHUL01000008.1 Clostridium botulinum strain ATCC 25763 contig_8, whole genome shotgun sequence 935,545
NZ_LHUL01000009.1 Clostridium botulinum strain ATCC 25763 contig_9, whole genome shotgun sequence 34,773
NZ_LHUL01000010.1 Clostridium botulinum strain ATCC 25763 contig_10, whole genome shotgun sequence 10,221
NZ_LHUL01000011.1 Clostridium botulinum strain ATCC 25763 contig_11, whole genome shotgun sequence 299,196
NZ_LHUL01000012.1 Clostridium botulinum strain ATCC 25763 contig_12, whole genome shotgun sequence 2,616
NZ_LHUL01000013.1 Clostridium botulinum strain ATCC 25763 contig_13, whole genome shotgun sequence 804
NZ_LHUL01000014.1 Clostridium botulinum strain ATCC 25763 contig_14, whole genome shotgun sequence 671
NZ_LHUL01000015.1 Clostridium botulinum strain ATCC 25763 contig_15, whole genome shotgun sequence 1,839
NZ_LHUL01000016.1 Clostridium botulinum strain ATCC 25763 contig_16, whole genome shotgun sequence 2,977
NZ_LHUL01000017.1 Clostridium botulinum strain ATCC 25763 contig_17, whole genome shotgun sequence 140,380
NZ_LHUL01000018.1 Clostridium botulinum strain ATCC 25763 contig_18, whole genome shotgun sequence 3,226
NZ_LHUL01000019.1 Clostridium botulinum strain ATCC 25763 contig_19, whole genome shotgun sequence 701
NZ_LHUL01000020.1 Clostridium botulinum strain ATCC 25763 contig_20, whole genome shotgun sequence 389
NZ_LHUL01000021.1 Clostridium botulinum strain ATCC 25763 contig_21, whole genome shotgun sequence 273
NZ_LHUL01000022.1 Clostridium botulinum strain ATCC 25763 contig_22, whole genome shotgun sequence 1,571
NZ_LHUL01000023.1 Clostridium botulinum strain ATCC 25763 contig_23, whole genome shotgun sequence 1,978
NZ_LHUL01000024.1 Clostridium botulinum strain ATCC 25763 contig_24, whole genome shotgun sequence 726
NZ_LHUL01000025.1 Clostridium botulinum strain ATCC 25763 contig_25, whole genome shotgun sequence 407
NZ_LHUL01000026.1 Clostridium botulinum strain ATCC 25763 contig_26, whole genome shotgun sequence 720,423
NZ_LHUL01000027.1 Clostridium botulinum strain ATCC 25763 contig_27, whole genome shotgun sequence 413,127
NZ_LHUL01000028.1 Clostridium botulinum strain ATCC 25763 contig_28, whole genome shotgun sequence 2,292

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory