fast.genomicscompare 6,575 genera of bacteria & archaea

 

Holtiella tumoricola Mt14

Genome identifier: GCF_001282685.1

NCBI assembly name: Niameyia massiliensis

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Cellulosilyticaceae, Holtiella, Holtiella tumoricola

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Niameybacter, Niameybacter massiliensis

Scaffolds: 11

Genes: 4,332 Protein-coding: 4,170 RNAs: 151 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LN875025.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 809
NZ_LN875026.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 17,038
NZ_LN875027.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 12,724
NZ_LN875028.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 1,360
NZ_LN875029.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 20,798
NZ_LN875030.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 128,731
NZ_LN875031.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 18,361
NZ_LN875032.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 132,031
NZ_LN875033.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 186,209
NZ_LN875034.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 669,611
NZ_LN875035.1 Niameybacter massiliensis strain Mt14, whole genome shotgun sequence 3,391,002

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory