fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudovibrio denitrificans JCM 12308

Genome identifier: GCF_001310815.1

NCBI assembly name: ASM131081v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Stappiaceae, Pseudovibrio, Pseudovibrio denitrificans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Stappiaceae, Pseudovibrio, Pseudovibrio denitrificans

Scaffolds: 94

Genes: 5,933 Protein-coding: 5,401 RNAs: 58 pseudogenes: 474

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BAZK01000001.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 397,502
NZ_BAZK01000002.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 389,342
NZ_BAZK01000003.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 385,983
NZ_BAZK01000004.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 379,577
NZ_BAZK01000005.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 338,610
NZ_BAZK01000006.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 315,875
NZ_BAZK01000007.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 307,070
NZ_BAZK01000008.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 421,911
NZ_BAZK01000009.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 240,940
NZ_BAZK01000010.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 238,870
NZ_BAZK01000011.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 219,938
NZ_BAZK01000012.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 179,567
NZ_BAZK01000013.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 138,487
NZ_BAZK01000014.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 131,222
NZ_BAZK01000015.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 124,035
NZ_BAZK01000016.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 120,119
NZ_BAZK01000017.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 109,738
NZ_BAZK01000018.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 109,465
NZ_BAZK01000019.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 109,037
NZ_BAZK01000020.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 94,935
NZ_BAZK01000021.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 89,470
NZ_BAZK01000022.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 87,859
NZ_BAZK01000023.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 86,723
NZ_BAZK01000024.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 84,355
NZ_BAZK01000025.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 71,059
NZ_BAZK01000026.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 66,349
NZ_BAZK01000027.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 63,153
NZ_BAZK01000028.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 62,966
NZ_BAZK01000029.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 58,488
NZ_BAZK01000030.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 57,366
NZ_BAZK01000031.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 57,010
NZ_BAZK01000032.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 50,382
NZ_BAZK01000033.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 49,573
NZ_BAZK01000034.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 45,515
NZ_BAZK01000035.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 41,670
NZ_BAZK01000036.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 30,883
NZ_BAZK01000037.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 24,188
NZ_BAZK01000038.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 23,489
NZ_BAZK01000039.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 22,896
NZ_BAZK01000040.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 22,246
NZ_BAZK01000041.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 21,801
NZ_BAZK01000042.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 16,516
NZ_BAZK01000043.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 15,880
NZ_BAZK01000044.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 15,648
NZ_BAZK01000045.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 13,881
NZ_BAZK01000046.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 12,472
NZ_BAZK01000047.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 11,984
NZ_BAZK01000048.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 11,659
NZ_BAZK01000049.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 6,939
NZ_BAZK01000050.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 5,728
NZ_BAZK01000051.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 5,287
NZ_BAZK01000052.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 4,989
NZ_BAZK01000053.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 4,673
NZ_BAZK01000054.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 4,384
NZ_BAZK01000055.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 4,248
NZ_BAZK01000056.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 2,838
NZ_BAZK01000057.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 2,672
NZ_BAZK01000058.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 2,654
NZ_BAZK01000059.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 2,620
NZ_BAZK01000060.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 2,072
NZ_BAZK01000061.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,964
NZ_BAZK01000062.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,907
NZ_BAZK01000063.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,759
NZ_BAZK01000064.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,674
NZ_BAZK01000065.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,656
NZ_BAZK01000066.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,577
NZ_BAZK01000067.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,546
NZ_BAZK01000068.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,454
NZ_BAZK01000069.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,369
NZ_BAZK01000070.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,345
NZ_BAZK01000071.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,315
NZ_BAZK01000072.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,299
NZ_BAZK01000073.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,275
NZ_BAZK01000074.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,261
NZ_BAZK01000075.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,201
NZ_BAZK01000076.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,197
NZ_BAZK01000077.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 1,191
NZ_BAZK01000078.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 992
NZ_BAZK01000079.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 932
NZ_BAZK01000080.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 907
NZ_BAZK01000081.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 878
NZ_BAZK01000082.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 822
NZ_BAZK01000083.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 769
NZ_BAZK01000084.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 725
NZ_BAZK01000085.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 683
NZ_BAZK01000086.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 636
NZ_BAZK01000087.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 631
NZ_BAZK01000088.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 630
NZ_BAZK01000089.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 628
NZ_BAZK01000090.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 606
NZ_BAZK01000091.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 549
NZ_BAZK01000092.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 529
NZ_BAZK01000093.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 523
NZ_BAZK01000094.1 Pseudovibrio denitrificans JCM 12308, whole genome shotgun sequence 500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory