fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingopyxis macrogoltabida 203

Genome identifier: GCF_001314325.1

NCBI assembly name: ASM131432v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingopyxis, Sphingopyxis macrogoltabida

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingopyxis, Sphingopyxis macrogoltabida

Scaffolds: 3

Genes: 5,621 Protein-coding: 5,489 RNAs: 63 pseudogenes: 69

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP009429.1 Sphingopyxis macrogoltabida strain 203 chromosome, complete genome 5,174,928
NZ_CP009430.1 Sphingopyxis macrogoltabida strain 203 plasmid unnamed, complete sequence 422,455
NZ_CP009431.1 Sphingopyxis macrogoltabida strain 203 plasmid unnamed, complete sequence 151,240

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory