fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phenylobacterium immobile (strain E)

Genome identifier: GCF_001375595.1

NCBI assembly name: Draft genome of P. immobile strain E (DSM 1986)

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae, Phenylobacterium, Phenylobacterium immobile

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae, Phenylobacterium, Phenylobacterium immobile

Scaffolds: 6

Genes: 3,275 Protein-coding: 3,197 RNAs: 52 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CVJQ01000001.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 2,879,815
NZ_CVJQ01000002.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 269,165
NZ_CVJQ01000003.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 103,803
NZ_CVJQ01000004.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 43,536
NZ_CVJQ01000005.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 13,003
NZ_CVJQ01000006.1 Phenylobacterium immobile (ATCC 35973) strain (strain E), whole genome shotgun sequence 19,248

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory