fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mediannikoviicoccus massiliensis SIT14

Genome identifier: GCF_001407835.1

NCBI assembly name: Lagierella massiliensis

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Tissierellales, Peptoniphilaceae, Mediannikoviicoccus, Mediannikoviicoccus massiliensis

NCBI taxonomy: Bacteria, Bacillota, Tissierellia, Tissierellales, Peptoniphilaceae, Lagierella, Lagierella massiliensis

Scaffolds: 5

Genes: 1,771 Protein-coding: 1,695 RNAs: 56 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CYUO01000001.1 Lagierella massiliensis strain SIT14, whole genome shotgun sequence 949
NZ_CYUO01000002.1 Lagierella massiliensis strain SIT14, whole genome shotgun sequence 1,003
NZ_CYUO01000003.1 Lagierella massiliensis strain SIT14, whole genome shotgun sequence 5,264
NZ_CYUO01000004.1 Lagierella massiliensis strain SIT14, whole genome shotgun sequence 757,038
NZ_CYUO01000005.1 Lagierella massiliensis strain SIT14, whole genome shotgun sequence 1,068,061

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory