fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aureimonas_A sp001424685 Leaf454

Genome identifier: GCF_001424685.1

NCBI assembly name: Leaf454

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Aureimonas_A, Aureimonas_A sp001424685

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Aureimonas

Scaffolds: 25

Genes: 4,455 Protein-coding: 4,342 RNAs: 52 pseudogenes: 61

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LMQT01000001.1 Aureimonas sp. Leaf454 contig_1, whole genome shotgun sequence 1,138,200
NZ_LMQT01000002.1 Aureimonas sp. Leaf454 contig_10, whole genome shotgun sequence 146,270
NZ_LMQT01000003.1 Aureimonas sp. Leaf454 contig_11, whole genome shotgun sequence 144,724
NZ_LMQT01000004.1 Aureimonas sp. Leaf454 contig_12, whole genome shotgun sequence 106,298
NZ_LMQT01000005.1 Aureimonas sp. Leaf454 contig_13, whole genome shotgun sequence 89,590
NZ_LMQT01000006.1 Aureimonas sp. Leaf454 contig_14, whole genome shotgun sequence 72,306
NZ_LMQT01000007.1 Aureimonas sp. Leaf454 contig_15, whole genome shotgun sequence 69,426
NZ_LMQT01000008.1 Aureimonas sp. Leaf454 contig_16, whole genome shotgun sequence 57,170
NZ_LMQT01000009.1 Aureimonas sp. Leaf454 contig_17, whole genome shotgun sequence 50,467
NZ_LMQT01000010.1 Aureimonas sp. Leaf454 contig_18, whole genome shotgun sequence 40,340
NZ_LMQT01000011.1 Aureimonas sp. Leaf454 contig_19, whole genome shotgun sequence 63,706
NZ_LMQT01000012.1 Aureimonas sp. Leaf454 contig_2, whole genome shotgun sequence 502,430
NZ_LMQT01000013.1 Aureimonas sp. Leaf454 contig_20, whole genome shotgun sequence 20,807
NZ_LMQT01000014.1 Aureimonas sp. Leaf454 contig_21, whole genome shotgun sequence 18,421
NZ_LMQT01000015.1 Aureimonas sp. Leaf454 contig_22, whole genome shotgun sequence 16,863
NZ_LMQT01000016.1 Aureimonas sp. Leaf454 contig_23, whole genome shotgun sequence 8,423
NZ_LMQT01000017.1 Aureimonas sp. Leaf454 contig_24, whole genome shotgun sequence 1,553
NZ_LMQT01000018.1 Aureimonas sp. Leaf454 contig_25, whole genome shotgun sequence 1,379
NZ_LMQT01000019.1 Aureimonas sp. Leaf454 contig_3, whole genome shotgun sequence 458,927
NZ_LMQT01000020.1 Aureimonas sp. Leaf454 contig_4, whole genome shotgun sequence 394,013
NZ_LMQT01000021.1 Aureimonas sp. Leaf454 contig_5, whole genome shotgun sequence 254,954
NZ_LMQT01000022.1 Aureimonas sp. Leaf454 contig_6, whole genome shotgun sequence 244,696
NZ_LMQT01000023.1 Aureimonas sp. Leaf454 contig_7, whole genome shotgun sequence 341,397
NZ_LMQT01000024.1 Aureimonas sp. Leaf454 contig_8, whole genome shotgun sequence 405,129
NZ_LMQT01000025.1 Aureimonas sp. Leaf454 contig_9, whole genome shotgun sequence 149,686

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory