fast.genomicscompare 6,575 genera of bacteria & archaea

 

Stenotrophomonas_A panacihumi JCM 16536

Genome identifier: GCF_001431645.1

NCBI assembly name: ASM143164v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Stenotrophomonas_A, Stenotrophomonas_A panacihumi

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Stenotrophomonas, Stenotrophomonas panacihumi

Scaffolds: 141

Genes: 3,636 Protein-coding: 3,520 RNAs: 58 pseudogenes: 58

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LLXU01000001.1 Stenotrophomonas panacihumi strain JCM 16536 contig_1, whole genome shotgun sequence 26,959
NZ_LLXU01000002.1 Stenotrophomonas panacihumi strain JCM 16536 contig_10, whole genome shotgun sequence 47,777
NZ_LLXU01000003.1 Stenotrophomonas panacihumi strain JCM 16536 contig_100, whole genome shotgun sequence 2,203
NZ_LLXU01000004.1 Stenotrophomonas panacihumi strain JCM 16536 contig_101, whole genome shotgun sequence 11,166
NZ_LLXU01000005.1 Stenotrophomonas panacihumi strain JCM 16536 contig_102, whole genome shotgun sequence 12,031
NZ_LLXU01000006.1 Stenotrophomonas panacihumi strain JCM 16536 contig_103, whole genome shotgun sequence 3,483
NZ_LLXU01000007.1 Stenotrophomonas panacihumi strain JCM 16536 contig_104, whole genome shotgun sequence 1,287
NZ_LLXU01000008.1 Stenotrophomonas panacihumi strain JCM 16536 contig_105, whole genome shotgun sequence 7,947
NZ_LLXU01000009.1 Stenotrophomonas panacihumi strain JCM 16536 contig_106, whole genome shotgun sequence 7,371
NZ_LLXU01000010.1 Stenotrophomonas panacihumi strain JCM 16536 contig_107, whole genome shotgun sequence 6,766
NZ_LLXU01000011.1 Stenotrophomonas panacihumi strain JCM 16536 contig_108, whole genome shotgun sequence 6,226
NZ_LLXU01000012.1 Stenotrophomonas panacihumi strain JCM 16536 contig_109, whole genome shotgun sequence 601
NZ_LLXU01000013.1 Stenotrophomonas panacihumi strain JCM 16536 contig_11, whole genome shotgun sequence 24,220
NZ_LLXU01000014.1 Stenotrophomonas panacihumi strain JCM 16536 contig_110, whole genome shotgun sequence 3,700
NZ_LLXU01000015.1 Stenotrophomonas panacihumi strain JCM 16536 contig_111, whole genome shotgun sequence 8,776
NZ_LLXU01000016.1 Stenotrophomonas panacihumi strain JCM 16536 contig_112, whole genome shotgun sequence 6,659
NZ_LLXU01000017.1 Stenotrophomonas panacihumi strain JCM 16536 contig_113, whole genome shotgun sequence 3,685
NZ_LLXU01000018.1 Stenotrophomonas panacihumi strain JCM 16536 contig_114, whole genome shotgun sequence 4,195
NZ_LLXU01000019.1 Stenotrophomonas panacihumi strain JCM 16536 contig_115, whole genome shotgun sequence 4,205
NZ_LLXU01000020.1 Stenotrophomonas panacihumi strain JCM 16536 contig_116, whole genome shotgun sequence 12,619
NZ_LLXU01000021.1 Stenotrophomonas panacihumi strain JCM 16536 contig_117, whole genome shotgun sequence 6,458
NZ_LLXU01000022.1 Stenotrophomonas panacihumi strain JCM 16536 contig_118, whole genome shotgun sequence 11,292
NZ_LLXU01000023.1 Stenotrophomonas panacihumi strain JCM 16536 contig_119, whole genome shotgun sequence 617
NZ_LLXU01000024.1 Stenotrophomonas panacihumi strain JCM 16536 contig_12, whole genome shotgun sequence 85,577
NZ_LLXU01000025.1 Stenotrophomonas panacihumi strain JCM 16536 contig_120, whole genome shotgun sequence 644
NZ_LLXU01000026.1 Stenotrophomonas panacihumi strain JCM 16536 contig_121, whole genome shotgun sequence 3,306
NZ_LLXU01000027.1 Stenotrophomonas panacihumi strain JCM 16536 contig_122, whole genome shotgun sequence 2,808
NZ_LLXU01000028.1 Stenotrophomonas panacihumi strain JCM 16536 contig_123, whole genome shotgun sequence 718
NZ_LLXU01000029.1 Stenotrophomonas panacihumi strain JCM 16536 contig_124, whole genome shotgun sequence 2,189
NZ_LLXU01000030.1 Stenotrophomonas panacihumi strain JCM 16536 contig_125, whole genome shotgun sequence 793
NZ_LLXU01000031.1 Stenotrophomonas panacihumi strain JCM 16536 contig_126, whole genome shotgun sequence 553
NZ_LLXU01000032.1 Stenotrophomonas panacihumi strain JCM 16536 contig_127, whole genome shotgun sequence 3,063
NZ_LLXU01000033.1 Stenotrophomonas panacihumi strain JCM 16536 contig_128, whole genome shotgun sequence 1,445
NZ_LLXU01000034.1 Stenotrophomonas panacihumi strain JCM 16536 contig_129, whole genome shotgun sequence 3,178
NZ_LLXU01000035.1 Stenotrophomonas panacihumi strain JCM 16536 contig_13, whole genome shotgun sequence 102,118
NZ_LLXU01000036.1 Stenotrophomonas panacihumi strain JCM 16536 contig_130, whole genome shotgun sequence 1,221
NZ_LLXU01000037.1 Stenotrophomonas panacihumi strain JCM 16536 contig_131, whole genome shotgun sequence 1,415
NZ_LLXU01000038.1 Stenotrophomonas panacihumi strain JCM 16536 contig_132, whole genome shotgun sequence 1,476
NZ_LLXU01000039.1 Stenotrophomonas panacihumi strain JCM 16536 contig_133, whole genome shotgun sequence 2,238
NZ_LLXU01000040.1 Stenotrophomonas panacihumi strain JCM 16536 contig_134, whole genome shotgun sequence 655
NZ_LLXU01000041.1 Stenotrophomonas panacihumi strain JCM 16536 contig_135, whole genome shotgun sequence 599
NZ_LLXU01000042.1 Stenotrophomonas panacihumi strain JCM 16536 contig_136, whole genome shotgun sequence 220
NZ_LLXU01000043.1 Stenotrophomonas panacihumi strain JCM 16536 contig_137, whole genome shotgun sequence 760
NZ_LLXU01000044.1 Stenotrophomonas panacihumi strain JCM 16536 contig_138, whole genome shotgun sequence 666
NZ_LLXU01000045.1 Stenotrophomonas panacihumi strain JCM 16536 contig_139, whole genome shotgun sequence 572
NZ_LLXU01000046.1 Stenotrophomonas panacihumi strain JCM 16536 contig_14, whole genome shotgun sequence 7,516
NZ_LLXU01000047.1 Stenotrophomonas panacihumi strain JCM 16536 contig_140, whole genome shotgun sequence 660
NZ_LLXU01000048.1 Stenotrophomonas panacihumi strain JCM 16536 contig_141, whole genome shotgun sequence 773
NZ_LLXU01000049.1 Stenotrophomonas panacihumi strain JCM 16536 contig_15, whole genome shotgun sequence 51,997
NZ_LLXU01000050.1 Stenotrophomonas panacihumi strain JCM 16536 contig_16, whole genome shotgun sequence 122,349
NZ_LLXU01000051.1 Stenotrophomonas panacihumi strain JCM 16536 contig_17, whole genome shotgun sequence 19,380
NZ_LLXU01000052.1 Stenotrophomonas panacihumi strain JCM 16536 contig_18, whole genome shotgun sequence 75,801
NZ_LLXU01000053.1 Stenotrophomonas panacihumi strain JCM 16536 contig_19, whole genome shotgun sequence 54,761
NZ_LLXU01000054.1 Stenotrophomonas panacihumi strain JCM 16536 contig_2, whole genome shotgun sequence 68,495
NZ_LLXU01000055.1 Stenotrophomonas panacihumi strain JCM 16536 contig_20, whole genome shotgun sequence 89,560
NZ_LLXU01000056.1 Stenotrophomonas panacihumi strain JCM 16536 contig_21, whole genome shotgun sequence 68,850
NZ_LLXU01000057.1 Stenotrophomonas panacihumi strain JCM 16536 contig_22, whole genome shotgun sequence 30,170
NZ_LLXU01000058.1 Stenotrophomonas panacihumi strain JCM 16536 contig_23, whole genome shotgun sequence 213,149
NZ_LLXU01000059.1 Stenotrophomonas panacihumi strain JCM 16536 contig_24, whole genome shotgun sequence 26,249
NZ_LLXU01000060.1 Stenotrophomonas panacihumi strain JCM 16536 contig_25, whole genome shotgun sequence 70,438
NZ_LLXU01000061.1 Stenotrophomonas panacihumi strain JCM 16536 contig_26, whole genome shotgun sequence 6,606
NZ_LLXU01000062.1 Stenotrophomonas panacihumi strain JCM 16536 contig_27, whole genome shotgun sequence 47,847
NZ_LLXU01000063.1 Stenotrophomonas panacihumi strain JCM 16536 contig_28, whole genome shotgun sequence 21,294
NZ_LLXU01000064.1 Stenotrophomonas panacihumi strain JCM 16536 contig_29, whole genome shotgun sequence 26,211
NZ_LLXU01000065.1 Stenotrophomonas panacihumi strain JCM 16536 contig_3, whole genome shotgun sequence 21,486
NZ_LLXU01000066.1 Stenotrophomonas panacihumi strain JCM 16536 contig_30, whole genome shotgun sequence 70,538
NZ_LLXU01000067.1 Stenotrophomonas panacihumi strain JCM 16536 contig_31, whole genome shotgun sequence 67,294
NZ_LLXU01000068.1 Stenotrophomonas panacihumi strain JCM 16536 contig_32, whole genome shotgun sequence 26,479
NZ_LLXU01000069.1 Stenotrophomonas panacihumi strain JCM 16536 contig_33, whole genome shotgun sequence 71,536
NZ_LLXU01000070.1 Stenotrophomonas panacihumi strain JCM 16536 contig_34, whole genome shotgun sequence 12,231
NZ_LLXU01000071.1 Stenotrophomonas panacihumi strain JCM 16536 contig_35, whole genome shotgun sequence 550
NZ_LLXU01000072.1 Stenotrophomonas panacihumi strain JCM 16536 contig_36, whole genome shotgun sequence 22,567
NZ_LLXU01000073.1 Stenotrophomonas panacihumi strain JCM 16536 contig_37, whole genome shotgun sequence 13,198
NZ_LLXU01000074.1 Stenotrophomonas panacihumi strain JCM 16536 contig_38, whole genome shotgun sequence 170,109
NZ_LLXU01000075.1 Stenotrophomonas panacihumi strain JCM 16536 contig_39, whole genome shotgun sequence 49,006
NZ_LLXU01000076.1 Stenotrophomonas panacihumi strain JCM 16536 contig_4, whole genome shotgun sequence 149,530
NZ_LLXU01000077.1 Stenotrophomonas panacihumi strain JCM 16536 contig_40, whole genome shotgun sequence 53,950
NZ_LLXU01000078.1 Stenotrophomonas panacihumi strain JCM 16536 contig_41, whole genome shotgun sequence 24,220
NZ_LLXU01000079.1 Stenotrophomonas panacihumi strain JCM 16536 contig_42, whole genome shotgun sequence 49,265
NZ_LLXU01000080.1 Stenotrophomonas panacihumi strain JCM 16536 contig_43, whole genome shotgun sequence 20,205
NZ_LLXU01000081.1 Stenotrophomonas panacihumi strain JCM 16536 contig_44, whole genome shotgun sequence 59,536
NZ_LLXU01000082.1 Stenotrophomonas panacihumi strain JCM 16536 contig_45, whole genome shotgun sequence 22,383
NZ_LLXU01000083.1 Stenotrophomonas panacihumi strain JCM 16536 contig_46, whole genome shotgun sequence 3,808
NZ_LLXU01000084.1 Stenotrophomonas panacihumi strain JCM 16536 contig_47, whole genome shotgun sequence 21,594
NZ_LLXU01000085.1 Stenotrophomonas panacihumi strain JCM 16536 contig_48, whole genome shotgun sequence 64,363
NZ_LLXU01000086.1 Stenotrophomonas panacihumi strain JCM 16536 contig_49, whole genome shotgun sequence 13,923
NZ_LLXU01000087.1 Stenotrophomonas panacihumi strain JCM 16536 contig_5, whole genome shotgun sequence 49,040
NZ_LLXU01000088.1 Stenotrophomonas panacihumi strain JCM 16536 contig_50, whole genome shotgun sequence 7,718
NZ_LLXU01000089.1 Stenotrophomonas panacihumi strain JCM 16536 contig_51, whole genome shotgun sequence 27,561
NZ_LLXU01000090.1 Stenotrophomonas panacihumi strain JCM 16536 contig_52, whole genome shotgun sequence 9,996
NZ_LLXU01000091.1 Stenotrophomonas panacihumi strain JCM 16536 contig_53, whole genome shotgun sequence 36,328
NZ_LLXU01000092.1 Stenotrophomonas panacihumi strain JCM 16536 contig_54, whole genome shotgun sequence 98,415
NZ_LLXU01000093.1 Stenotrophomonas panacihumi strain JCM 16536 contig_55, whole genome shotgun sequence 26,396
NZ_LLXU01000094.1 Stenotrophomonas panacihumi strain JCM 16536 contig_56, whole genome shotgun sequence 13,718
NZ_LLXU01000095.1 Stenotrophomonas panacihumi strain JCM 16536 contig_57, whole genome shotgun sequence 105,655
NZ_LLXU01000096.1 Stenotrophomonas panacihumi strain JCM 16536 contig_58, whole genome shotgun sequence 17,577
NZ_LLXU01000097.1 Stenotrophomonas panacihumi strain JCM 16536 contig_59, whole genome shotgun sequence 4,270
NZ_LLXU01000098.1 Stenotrophomonas panacihumi strain JCM 16536 contig_6, whole genome shotgun sequence 64,703
NZ_LLXU01000099.1 Stenotrophomonas panacihumi strain JCM 16536 contig_60, whole genome shotgun sequence 4,767
NZ_LLXU01000100.1 Stenotrophomonas panacihumi strain JCM 16536 contig_61, whole genome shotgun sequence 43,590
NZ_LLXU01000101.1 Stenotrophomonas panacihumi strain JCM 16536 contig_62, whole genome shotgun sequence 14,186
NZ_LLXU01000102.1 Stenotrophomonas panacihumi strain JCM 16536 contig_63, whole genome shotgun sequence 15,163
NZ_LLXU01000103.1 Stenotrophomonas panacihumi strain JCM 16536 contig_64, whole genome shotgun sequence 27,106
NZ_LLXU01000104.1 Stenotrophomonas panacihumi strain JCM 16536 contig_65, whole genome shotgun sequence 9,305
NZ_LLXU01000105.1 Stenotrophomonas panacihumi strain JCM 16536 contig_66, whole genome shotgun sequence 9,159
NZ_LLXU01000106.1 Stenotrophomonas panacihumi strain JCM 16536 contig_67, whole genome shotgun sequence 26,336
NZ_LLXU01000107.1 Stenotrophomonas panacihumi strain JCM 16536 contig_68, whole genome shotgun sequence 21,356
NZ_LLXU01000108.1 Stenotrophomonas panacihumi strain JCM 16536 contig_69, whole genome shotgun sequence 68,113
NZ_LLXU01000109.1 Stenotrophomonas panacihumi strain JCM 16536 contig_7, whole genome shotgun sequence 18,769
NZ_LLXU01000110.1 Stenotrophomonas panacihumi strain JCM 16536 contig_70, whole genome shotgun sequence 12,370
NZ_LLXU01000111.1 Stenotrophomonas panacihumi strain JCM 16536 contig_71, whole genome shotgun sequence 25,281
NZ_LLXU01000112.1 Stenotrophomonas panacihumi strain JCM 16536 contig_72, whole genome shotgun sequence 11,777
NZ_LLXU01000113.1 Stenotrophomonas panacihumi strain JCM 16536 contig_73, whole genome shotgun sequence 37,786
NZ_LLXU01000114.1 Stenotrophomonas panacihumi strain JCM 16536 contig_74, whole genome shotgun sequence 17,667
NZ_LLXU01000115.1 Stenotrophomonas panacihumi strain JCM 16536 contig_75, whole genome shotgun sequence 18,749
NZ_LLXU01000116.1 Stenotrophomonas panacihumi strain JCM 16536 contig_76, whole genome shotgun sequence 35,062
NZ_LLXU01000117.1 Stenotrophomonas panacihumi strain JCM 16536 contig_77, whole genome shotgun sequence 11,365
NZ_LLXU01000118.1 Stenotrophomonas panacihumi strain JCM 16536 contig_78, whole genome shotgun sequence 9,336
NZ_LLXU01000119.1 Stenotrophomonas panacihumi strain JCM 16536 contig_79, whole genome shotgun sequence 16,033
NZ_LLXU01000120.1 Stenotrophomonas panacihumi strain JCM 16536 contig_8, whole genome shotgun sequence 56,105
NZ_LLXU01000121.1 Stenotrophomonas panacihumi strain JCM 16536 contig_80, whole genome shotgun sequence 22,238
NZ_LLXU01000122.1 Stenotrophomonas panacihumi strain JCM 16536 contig_81, whole genome shotgun sequence 20,244
NZ_LLXU01000123.1 Stenotrophomonas panacihumi strain JCM 16536 contig_82, whole genome shotgun sequence 23,606
NZ_LLXU01000124.1 Stenotrophomonas panacihumi strain JCM 16536 contig_83, whole genome shotgun sequence 18,658
NZ_LLXU01000125.1 Stenotrophomonas panacihumi strain JCM 16536 contig_84, whole genome shotgun sequence 4,179
NZ_LLXU01000126.1 Stenotrophomonas panacihumi strain JCM 16536 contig_85, whole genome shotgun sequence 55,766
NZ_LLXU01000127.1 Stenotrophomonas panacihumi strain JCM 16536 contig_86, whole genome shotgun sequence 7,784
NZ_LLXU01000128.1 Stenotrophomonas panacihumi strain JCM 16536 contig_87, whole genome shotgun sequence 55,417
NZ_LLXU01000129.1 Stenotrophomonas panacihumi strain JCM 16536 contig_88, whole genome shotgun sequence 33,545
NZ_LLXU01000130.1 Stenotrophomonas panacihumi strain JCM 16536 contig_89, whole genome shotgun sequence 30,230
NZ_LLXU01000131.1 Stenotrophomonas panacihumi strain JCM 16536 contig_9, whole genome shotgun sequence 68,937
NZ_LLXU01000132.1 Stenotrophomonas panacihumi strain JCM 16536 contig_90, whole genome shotgun sequence 21,761
NZ_LLXU01000133.1 Stenotrophomonas panacihumi strain JCM 16536 contig_91, whole genome shotgun sequence 17,640
NZ_LLXU01000134.1 Stenotrophomonas panacihumi strain JCM 16536 contig_92, whole genome shotgun sequence 10,587
NZ_LLXU01000135.1 Stenotrophomonas panacihumi strain JCM 16536 contig_93, whole genome shotgun sequence 13,872
NZ_LLXU01000136.1 Stenotrophomonas panacihumi strain JCM 16536 contig_94, whole genome shotgun sequence 34,283
NZ_LLXU01000137.1 Stenotrophomonas panacihumi strain JCM 16536 contig_95, whole genome shotgun sequence 30,739
NZ_LLXU01000138.1 Stenotrophomonas panacihumi strain JCM 16536 contig_96, whole genome shotgun sequence 5,691
NZ_LLXU01000139.1 Stenotrophomonas panacihumi strain JCM 16536 contig_97, whole genome shotgun sequence 9,366
NZ_LLXU01000140.1 Stenotrophomonas panacihumi strain JCM 16536 contig_98, whole genome shotgun sequence 15,950
NZ_LLXU01000141.1 Stenotrophomonas panacihumi strain JCM 16536 contig_99, whole genome shotgun sequence 5,570

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory