fast.genomicscompare 6,575 genera of bacteria & archaea

 

Formosa algae KMM 3553

Genome identifier: GCF_001439665.1

NCBI assembly name: ASM143966v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Formosa, Formosa algae

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Formosa, Formosa algae

Scaffolds: 82

Genes: 3,690 Protein-coding: 3,614 RNAs: 48 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LMAK01000001.1 Formosa algae strain KMM 3553 contig00001, whole genome shotgun sequence 783
NZ_LMAK01000002.1 Formosa algae strain KMM 3553 contig00002, whole genome shotgun sequence 52,884
NZ_LMAK01000003.1 Formosa algae strain KMM 3553 contig00003, whole genome shotgun sequence 67,662
NZ_LMAK01000004.1 Formosa algae strain KMM 3553 contig00004, whole genome shotgun sequence 194,096
NZ_LMAK01000005.1 Formosa algae strain KMM 3553 contig00005, whole genome shotgun sequence 4,321
NZ_LMAK01000006.1 Formosa algae strain KMM 3553 contig00006, whole genome shotgun sequence 140,870
NZ_LMAK01000007.1 Formosa algae strain KMM 3553 contig00007, whole genome shotgun sequence 177,225
NZ_LMAK01000008.1 Formosa algae strain KMM 3553 contig00008, whole genome shotgun sequence 66,674
NZ_LMAK01000009.1 Formosa algae strain KMM 3553 contig00009, whole genome shotgun sequence 49,052
NZ_LMAK01000010.1 Formosa algae strain KMM 3553 contig00010, whole genome shotgun sequence 76,367
NZ_LMAK01000011.1 Formosa algae strain KMM 3553 contig00011, whole genome shotgun sequence 231,898
NZ_LMAK01000012.1 Formosa algae strain KMM 3553 contig00012, whole genome shotgun sequence 1,154
NZ_LMAK01000013.1 Formosa algae strain KMM 3553 contig00013, whole genome shotgun sequence 76,268
NZ_LMAK01000014.1 Formosa algae strain KMM 3553 contig00014, whole genome shotgun sequence 275,779
NZ_LMAK01000015.1 Formosa algae strain KMM 3553 contig00015, whole genome shotgun sequence 93,749
NZ_LMAK01000016.1 Formosa algae strain KMM 3553 contig00016, whole genome shotgun sequence 70,635
NZ_LMAK01000017.1 Formosa algae strain KMM 3553 contig00017, whole genome shotgun sequence 106,333
NZ_LMAK01000018.1 Formosa algae strain KMM 3553 contig00018, whole genome shotgun sequence 26,223
NZ_LMAK01000019.1 Formosa algae strain KMM 3553 contig00019, whole genome shotgun sequence 141,490
NZ_LMAK01000020.1 Formosa algae strain KMM 3553 contig00020, whole genome shotgun sequence 50,355
NZ_LMAK01000021.1 Formosa algae strain KMM 3553 contig00021, whole genome shotgun sequence 39,411
NZ_LMAK01000022.1 Formosa algae strain KMM 3553 contig00022, whole genome shotgun sequence 36,042
NZ_LMAK01000023.1 Formosa algae strain KMM 3553 contig00023, whole genome shotgun sequence 665
NZ_LMAK01000024.1 Formosa algae strain KMM 3553 contig00024, whole genome shotgun sequence 30,343
NZ_LMAK01000025.1 Formosa algae strain KMM 3553 contig00025, whole genome shotgun sequence 28,522
NZ_LMAK01000026.1 Formosa algae strain KMM 3553 contig00026, whole genome shotgun sequence 37,906
NZ_LMAK01000027.1 Formosa algae strain KMM 3553 contig00027, whole genome shotgun sequence 19,987
NZ_LMAK01000028.1 Formosa algae strain KMM 3553 contig00028, whole genome shotgun sequence 25,366
NZ_LMAK01000029.1 Formosa algae strain KMM 3553 contig00029, whole genome shotgun sequence 3,648
NZ_LMAK01000030.1 Formosa algae strain KMM 3553 contig00030, whole genome shotgun sequence 84,961
NZ_LMAK01000031.1 Formosa algae strain KMM 3553 contig00031, whole genome shotgun sequence 15,788
NZ_LMAK01000032.1 Formosa algae strain KMM 3553 contig00032, whole genome shotgun sequence 8,618
NZ_LMAK01000033.1 Formosa algae strain KMM 3553 contig00033, whole genome shotgun sequence 20,353
NZ_LMAK01000034.1 Formosa algae strain KMM 3553 contig00034, whole genome shotgun sequence 72,398
NZ_LMAK01000035.1 Formosa algae strain KMM 3553 contig00035, whole genome shotgun sequence 48,290
NZ_LMAK01000036.1 Formosa algae strain KMM 3553 contig00036, whole genome shotgun sequence 98,308
NZ_LMAK01000037.1 Formosa algae strain KMM 3553 contig00037, whole genome shotgun sequence 40,128
NZ_LMAK01000038.1 Formosa algae strain KMM 3553 contig00038, whole genome shotgun sequence 23,612
NZ_LMAK01000039.1 Formosa algae strain KMM 3553 contig00039, whole genome shotgun sequence 20,385
NZ_LMAK01000040.1 Formosa algae strain KMM 3553 contig00040, whole genome shotgun sequence 6,393
NZ_LMAK01000041.1 Formosa algae strain KMM 3553 contig00041, whole genome shotgun sequence 44,558
NZ_LMAK01000042.1 Formosa algae strain KMM 3553 contig00042, whole genome shotgun sequence 10,539
NZ_LMAK01000043.1 Formosa algae strain KMM 3553 contig00043, whole genome shotgun sequence 17,763
NZ_LMAK01000044.1 Formosa algae strain KMM 3553 contig00044, whole genome shotgun sequence 15,382
NZ_LMAK01000045.1 Formosa algae strain KMM 3553 contig00045, whole genome shotgun sequence 162,634
NZ_LMAK01000046.1 Formosa algae strain KMM 3553 contig00046, whole genome shotgun sequence 25,920
NZ_LMAK01000047.1 Formosa algae strain KMM 3553 contig00047, whole genome shotgun sequence 10,234
NZ_LMAK01000048.1 Formosa algae strain KMM 3553 contig00048, whole genome shotgun sequence 22,065
NZ_LMAK01000049.1 Formosa algae strain KMM 3553 contig00049, whole genome shotgun sequence 4,728
NZ_LMAK01000050.1 Formosa algae strain KMM 3553 contig00050, whole genome shotgun sequence 3,672
NZ_LMAK01000051.1 Formosa algae strain KMM 3553 contig00051, whole genome shotgun sequence 3,344
NZ_LMAK01000052.1 Formosa algae strain KMM 3553 contig00052, whole genome shotgun sequence 7,775
NZ_LMAK01000053.1 Formosa algae strain KMM 3553 contig00053, whole genome shotgun sequence 3,081
NZ_LMAK01000054.1 Formosa algae strain KMM 3553 contig00054, whole genome shotgun sequence 2,317
NZ_LMAK01000055.1 Formosa algae strain KMM 3553 contig00055, whole genome shotgun sequence 6,920
NZ_LMAK01000056.1 Formosa algae strain KMM 3553 contig00056, whole genome shotgun sequence 70,019
NZ_LMAK01000057.1 Formosa algae strain KMM 3553 contig00057, whole genome shotgun sequence 2,265
NZ_LMAK01000058.1 Formosa algae strain KMM 3553 contig00058, whole genome shotgun sequence 1,235
NZ_LMAK01000059.1 Formosa algae strain KMM 3553 contig00059, whole genome shotgun sequence 996
NZ_LMAK01000060.1 Formosa algae strain KMM 3553 contig00060, whole genome shotgun sequence 743
NZ_LMAK01000061.1 Formosa algae strain KMM 3553 contig00061, whole genome shotgun sequence 9,233
NZ_LMAK01000062.1 Formosa algae strain KMM 3553 contig00062, whole genome shotgun sequence 104,774
NZ_LMAK01000063.1 Formosa algae strain KMM 3553 contig00063, whole genome shotgun sequence 116,819
NZ_LMAK01000064.1 Formosa algae strain KMM 3553 contig00064, whole genome shotgun sequence 3,099
NZ_LMAK01000065.1 Formosa algae strain KMM 3553 contig00065, whole genome shotgun sequence 30,375
NZ_LMAK01000066.1 Formosa algae strain KMM 3553 contig00066, whole genome shotgun sequence 11,695
NZ_LMAK01000067.1 Formosa algae strain KMM 3553 contig00067, whole genome shotgun sequence 234,971
NZ_LMAK01000068.1 Formosa algae strain KMM 3553 contig00068, whole genome shotgun sequence 17,665
NZ_LMAK01000069.1 Formosa algae strain KMM 3553 contig00069, whole genome shotgun sequence 28,499
NZ_LMAK01000070.1 Formosa algae strain KMM 3553 contig00070, whole genome shotgun sequence 4,378
NZ_LMAK01000071.1 Formosa algae strain KMM 3553 contig00071, whole genome shotgun sequence 4,535
NZ_LMAK01000072.1 Formosa algae strain KMM 3553 contig00072, whole genome shotgun sequence 816
NZ_LMAK01000073.1 Formosa algae strain KMM 3553 contig00073, whole genome shotgun sequence 115,062
NZ_LMAK01000074.1 Formosa algae strain KMM 3553 contig00074, whole genome shotgun sequence 11,790
NZ_LMAK01000075.1 Formosa algae strain KMM 3553 contig00075, whole genome shotgun sequence 69,325
NZ_LMAK01000076.1 Formosa algae strain KMM 3553 contig00076, whole genome shotgun sequence 99,695
NZ_LMAK01000077.1 Formosa algae strain KMM 3553 contig00077, whole genome shotgun sequence 42,740
NZ_LMAK01000078.1 Formosa algae strain KMM 3553 contig00078, whole genome shotgun sequence 210,315
NZ_LMAK01000079.1 Formosa algae strain KMM 3553 contig00079, whole genome shotgun sequence 28,363
NZ_LMAK01000080.1 Formosa algae strain KMM 3553 contig00080, whole genome shotgun sequence 34,711
NZ_LMAK01000081.1 Formosa algae strain KMM 3553 contig00081, whole genome shotgun sequence 27,965
NZ_LMAK01000082.1 Formosa algae strain KMM 3553 contig00082, whole genome shotgun sequence 104,504

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory