fast.genomicscompare 6,575 genera of bacteria & archaea

 

Defluviitalea phaphyphila Alg1

Genome identifier: GCF_001466305.1

NCBI assembly name: ASM146630v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Defluviitaleaceae, Defluviitalea, Defluviitalea phaphyphila

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Defluviitaleaceae, Defluviitalea, Defluviitalea phaphyphila

Scaffolds: 76

Genes: 2,495 Protein-coding: 2,405 RNAs: 64 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JWID01000001.1 Defluviitalea phaphyphila strain Alg1 scaffold1, whole genome shotgun sequence 246,084
NZ_JWID01000002.1 Defluviitalea phaphyphila strain Alg1 scaffold2, whole genome shotgun sequence 314,254
NZ_JWID01000003.1 Defluviitalea phaphyphila strain Alg1 scaffold3, whole genome shotgun sequence 259,480
NZ_JWID01000004.1 Defluviitalea phaphyphila strain Alg1 scaffold4, whole genome shotgun sequence 262,338
NZ_JWID01000005.1 Defluviitalea phaphyphila strain Alg1 scaffold5, whole genome shotgun sequence 128,534
NZ_JWID01000006.1 Defluviitalea phaphyphila strain Alg1 scaffold6, whole genome shotgun sequence 128,883
NZ_JWID01000007.1 Defluviitalea phaphyphila strain Alg1 scaffold7, whole genome shotgun sequence 94,695
NZ_JWID01000008.1 Defluviitalea phaphyphila strain Alg1 scaffold8, whole genome shotgun sequence 76,224
NZ_JWID01000009.1 Defluviitalea phaphyphila strain Alg1 scaffold9, whole genome shotgun sequence 97,156
NZ_JWID01000010.1 Defluviitalea phaphyphila strain Alg1 scaffold10, whole genome shotgun sequence 59,598
NZ_JWID01000011.1 Defluviitalea phaphyphila strain Alg1 scaffold11, whole genome shotgun sequence 120,509
NZ_JWID01000012.1 Defluviitalea phaphyphila strain Alg1 scaffold12, whole genome shotgun sequence 48,245
NZ_JWID01000013.1 Defluviitalea phaphyphila strain Alg1 scaffold13, whole genome shotgun sequence 48,057
NZ_JWID01000014.1 Defluviitalea phaphyphila strain Alg1 scaffold14, whole genome shotgun sequence 40,373
NZ_JWID01000015.1 Defluviitalea phaphyphila strain Alg1 scaffold15, whole genome shotgun sequence 39,454
NZ_JWID01000016.1 Defluviitalea phaphyphila strain Alg1 scaffold16, whole genome shotgun sequence 38,040
NZ_JWID01000017.1 Defluviitalea phaphyphila strain Alg1 scaffold17, whole genome shotgun sequence 39,148
NZ_JWID01000018.1 Defluviitalea phaphyphila strain Alg1 scaffold18, whole genome shotgun sequence 65,031
NZ_JWID01000019.1 Defluviitalea phaphyphila strain Alg1 scaffold19, whole genome shotgun sequence 32,063
NZ_JWID01000020.1 Defluviitalea phaphyphila strain Alg1 scaffold20, whole genome shotgun sequence 57,174
NZ_JWID01000021.1 Defluviitalea phaphyphila strain Alg1 scaffold21, whole genome shotgun sequence 32,739
NZ_JWID01000022.1 Defluviitalea phaphyphila strain Alg1 scaffold22, whole genome shotgun sequence 17,355
NZ_JWID01000023.1 Defluviitalea phaphyphila strain Alg1 scaffold23, whole genome shotgun sequence 17,266
NZ_JWID01000024.1 Defluviitalea phaphyphila strain Alg1 scaffold24, whole genome shotgun sequence 16,905
NZ_JWID01000025.1 Defluviitalea phaphyphila strain Alg1 scaffold25, whole genome shotgun sequence 15,218
NZ_JWID01000026.1 Defluviitalea phaphyphila strain Alg1 scaffold26, whole genome shotgun sequence 14,292
NZ_JWID01000027.1 Defluviitalea phaphyphila strain Alg1 scaffold27, whole genome shotgun sequence 13,946
NZ_JWID01000028.1 Defluviitalea phaphyphila strain Alg1 scaffold28, whole genome shotgun sequence 13,723
NZ_JWID01000029.1 Defluviitalea phaphyphila strain Alg1 scaffold29, whole genome shotgun sequence 15,927
NZ_JWID01000030.1 Defluviitalea phaphyphila strain Alg1 scaffold30, whole genome shotgun sequence 16,771
NZ_JWID01000031.1 Defluviitalea phaphyphila strain Alg1 scaffold31, whole genome shotgun sequence 9,513
NZ_JWID01000032.1 Defluviitalea phaphyphila strain Alg1 scaffold32, whole genome shotgun sequence 9,479
NZ_JWID01000033.1 Defluviitalea phaphyphila strain Alg1 scaffold33, whole genome shotgun sequence 8,963
NZ_JWID01000034.1 Defluviitalea phaphyphila strain Alg1 scaffold34, whole genome shotgun sequence 10,430
NZ_JWID01000035.1 Defluviitalea phaphyphila strain Alg1 scaffold35, whole genome shotgun sequence 13,670
NZ_JWID01000036.1 Defluviitalea phaphyphila strain Alg1 scaffold36, whole genome shotgun sequence 7,672
NZ_JWID01000037.1 Defluviitalea phaphyphila strain Alg1 scaffold37, whole genome shotgun sequence 7,119
NZ_JWID01000038.1 Defluviitalea phaphyphila strain Alg1 scaffold38, whole genome shotgun sequence 6,185
NZ_JWID01000039.1 Defluviitalea phaphyphila strain Alg1 scaffold39, whole genome shotgun sequence 5,776
NZ_JWID01000040.1 Defluviitalea phaphyphila strain Alg1 scaffold40, whole genome shotgun sequence 6,138
NZ_JWID01000041.1 Defluviitalea phaphyphila strain Alg1 scaffold41, whole genome shotgun sequence 13,135
NZ_JWID01000042.1 Defluviitalea phaphyphila strain Alg1 scaffold42, whole genome shotgun sequence 8,139
NZ_JWID01000043.1 Defluviitalea phaphyphila strain Alg1 scaffold43, whole genome shotgun sequence 4,022
NZ_JWID01000044.1 Defluviitalea phaphyphila strain Alg1 scaffold44, whole genome shotgun sequence 3,311
NZ_JWID01000045.1 Defluviitalea phaphyphila strain Alg1 scaffold45, whole genome shotgun sequence 2,908
NZ_JWID01000046.1 Defluviitalea phaphyphila strain Alg1 scaffold46, whole genome shotgun sequence 2,833
NZ_JWID01000047.1 Defluviitalea phaphyphila strain Alg1 scaffold47, whole genome shotgun sequence 2,700
NZ_JWID01000048.1 Defluviitalea phaphyphila strain Alg1 scaffold48, whole genome shotgun sequence 4,099
NZ_JWID01000049.1 Defluviitalea phaphyphila strain Alg1 scaffold49, whole genome shotgun sequence 3,083
NZ_JWID01000050.1 Defluviitalea phaphyphila strain Alg1 scaffold50, whole genome shotgun sequence 2,246
NZ_JWID01000051.1 Defluviitalea phaphyphila strain Alg1 scaffold51, whole genome shotgun sequence 2,234
NZ_JWID01000052.1 Defluviitalea phaphyphila strain Alg1 scaffold52, whole genome shotgun sequence 3,352
NZ_JWID01000053.1 Defluviitalea phaphyphila strain Alg1 scaffold53, whole genome shotgun sequence 2,116
NZ_JWID01000054.1 Defluviitalea phaphyphila strain Alg1 scaffold54, whole genome shotgun sequence 2,068
NZ_JWID01000055.1 Defluviitalea phaphyphila strain Alg1 scaffold55, whole genome shotgun sequence 1,861
NZ_JWID01000056.1 Defluviitalea phaphyphila strain Alg1 scaffold56, whole genome shotgun sequence 2,808
NZ_JWID01000057.1 Defluviitalea phaphyphila strain Alg1 scaffold57, whole genome shotgun sequence 4,187
NZ_JWID01000058.1 Defluviitalea phaphyphila strain Alg1 scaffold58, whole genome shotgun sequence 2,399
NZ_JWID01000059.1 Defluviitalea phaphyphila strain Alg1 scaffold59, whole genome shotgun sequence 1,306
NZ_JWID01000060.1 Defluviitalea phaphyphila strain Alg1 scaffold60, whole genome shotgun sequence 1,133
NZ_JWID01000061.1 Defluviitalea phaphyphila strain Alg1 scaffold61, whole genome shotgun sequence 1,767
NZ_JWID01000062.1 Defluviitalea phaphyphila strain Alg1 scaffold62, whole genome shotgun sequence 1,016
NZ_JWID01000063.1 Defluviitalea phaphyphila strain Alg1 scaffold63, whole genome shotgun sequence 967
NZ_JWID01000064.1 Defluviitalea phaphyphila strain Alg1 scaffold64, whole genome shotgun sequence 1,621
NZ_JWID01000065.1 Defluviitalea phaphyphila strain Alg1 scaffold65, whole genome shotgun sequence 895
NZ_JWID01000066.1 Defluviitalea phaphyphila strain Alg1 scaffold66, whole genome shotgun sequence 844
NZ_JWID01000067.1 Defluviitalea phaphyphila strain Alg1 scaffold67, whole genome shotgun sequence 1,262
NZ_JWID01000068.1 Defluviitalea phaphyphila strain Alg1 scaffold68, whole genome shotgun sequence 1,383
NZ_JWID01000069.1 Defluviitalea phaphyphila strain Alg1 scaffold69, whole genome shotgun sequence 754
NZ_JWID01000070.1 Defluviitalea phaphyphila strain Alg1 scaffold70, whole genome shotgun sequence 1,270
NZ_JWID01000071.1 Defluviitalea phaphyphila strain Alg1 scaffold71, whole genome shotgun sequence 692
NZ_JWID01000072.1 Defluviitalea phaphyphila strain Alg1 scaffold72, whole genome shotgun sequence 662
NZ_JWID01000073.1 Defluviitalea phaphyphila strain Alg1 scaffold73, whole genome shotgun sequence 603
NZ_JWID01000074.1 Defluviitalea phaphyphila strain Alg1 scaffold74, whole genome shotgun sequence 597
NZ_JWID01000075.1 Defluviitalea phaphyphila strain Alg1 scaffold75, whole genome shotgun sequence 560
NZ_JWID01000076.1 Defluviitalea phaphyphila strain Alg1 scaffold76, whole genome shotgun sequence 551

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory