fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudoponticoccus marisrubri SJ5A-1

Genome identifier: GCF_001482405.1

NCBI assembly name: ASM148240v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudoponticoccus, Pseudoponticoccus marisrubri

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Pseudoponticoccus, Pseudoponticoccus marisrubri

Scaffolds: 116

Genes: 4,523 Protein-coding: 4,400 RNAs: 53 pseudogenes: 70

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LPXO01000001.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100000, whole genome shotgun sequence 749,978
NZ_LPXO01000002.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100001, whole genome shotgun sequence 479,022
NZ_LPXO01000003.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100002, whole genome shotgun sequence 410,294
NZ_LPXO01000004.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100003, whole genome shotgun sequence 349,203
NZ_LPXO01000005.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100004, whole genome shotgun sequence 301,262
NZ_LPXO01000006.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100005, whole genome shotgun sequence 300,377
NZ_LPXO01000007.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100006, whole genome shotgun sequence 201,113
NZ_LPXO01000008.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100007, whole genome shotgun sequence 180,491
NZ_LPXO01000009.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100008, whole genome shotgun sequence 161,052
NZ_LPXO01000010.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100009, whole genome shotgun sequence 158,304
NZ_LPXO01000011.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100010, whole genome shotgun sequence 150,595
NZ_LPXO01000012.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100011, whole genome shotgun sequence 135,046
NZ_LPXO01000013.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100012, whole genome shotgun sequence 106,760
NZ_LPXO01000014.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100013, whole genome shotgun sequence 104,310
NZ_LPXO01000015.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100014, whole genome shotgun sequence 93,670
NZ_LPXO01000016.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100015, whole genome shotgun sequence 85,350
NZ_LPXO01000017.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100016, whole genome shotgun sequence 69,555
NZ_LPXO01000018.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100017, whole genome shotgun sequence 68,439
NZ_LPXO01000019.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100018, whole genome shotgun sequence 66,324
NZ_LPXO01000020.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100019, whole genome shotgun sequence 53,616
NZ_LPXO01000021.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100020, whole genome shotgun sequence 47,981
NZ_LPXO01000022.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100021, whole genome shotgun sequence 46,067
NZ_LPXO01000023.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100022, whole genome shotgun sequence 43,291
NZ_LPXO01000024.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100023, whole genome shotgun sequence 34,560
NZ_LPXO01000025.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100024, whole genome shotgun sequence 24,466
NZ_LPXO01000026.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100025, whole genome shotgun sequence 21,220
NZ_LPXO01000027.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100026, whole genome shotgun sequence 17,187
NZ_LPXO01000028.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100027, whole genome shotgun sequence 14,170
NZ_LPXO01000029.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100028, whole genome shotgun sequence 11,755
NZ_LPXO01000030.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100029, whole genome shotgun sequence 8,035
NZ_LPXO01000031.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100030, whole genome shotgun sequence 7,788
NZ_LPXO01000032.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100031, whole genome shotgun sequence 7,461
NZ_LPXO01000033.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100032, whole genome shotgun sequence 4,934
NZ_LPXO01000034.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100033, whole genome shotgun sequence 4,510
NZ_LPXO01000035.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100034, whole genome shotgun sequence 3,635
NZ_LPXO01000036.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100035, whole genome shotgun sequence 2,817
NZ_LPXO01000037.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100036, whole genome shotgun sequence 2,328
NZ_LPXO01000038.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100037, whole genome shotgun sequence 2,276
NZ_LPXO01000039.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100038, whole genome shotgun sequence 2,008
NZ_LPXO01000040.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100039, whole genome shotgun sequence 1,587
NZ_LPXO01000041.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100040, whole genome shotgun sequence 1,437
NZ_LPXO01000042.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100041, whole genome shotgun sequence 1,381
NZ_LPXO01000043.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100042, whole genome shotgun sequence 1,346
NZ_LPXO01000044.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100043, whole genome shotgun sequence 1,268
NZ_LPXO01000045.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100044, whole genome shotgun sequence 1,110
NZ_LPXO01000046.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100045, whole genome shotgun sequence 1,099
NZ_LPXO01000047.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100046, whole genome shotgun sequence 838
NZ_LPXO01000048.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100047, whole genome shotgun sequence 703
NZ_LPXO01000049.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100048, whole genome shotgun sequence 579
NZ_LPXO01000050.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100049, whole genome shotgun sequence 475
NZ_LPXO01000051.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100050, whole genome shotgun sequence 433
NZ_LPXO01000052.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100051, whole genome shotgun sequence 464
NZ_LPXO01000053.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100052, whole genome shotgun sequence 460
NZ_LPXO01000054.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100053, whole genome shotgun sequence 449
NZ_LPXO01000055.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100054, whole genome shotgun sequence 425
NZ_LPXO01000056.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100055, whole genome shotgun sequence 424
NZ_LPXO01000057.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100056, whole genome shotgun sequence 345
NZ_LPXO01000058.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100057, whole genome shotgun sequence 342
NZ_LPXO01000059.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100058, whole genome shotgun sequence 353
NZ_LPXO01000060.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100059, whole genome shotgun sequence 338
NZ_LPXO01000061.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100060, whole genome shotgun sequence 332
NZ_LPXO01000062.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100061, whole genome shotgun sequence 329
NZ_LPXO01000063.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100062, whole genome shotgun sequence 328
NZ_LPXO01000064.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100063, whole genome shotgun sequence 315
NZ_LPXO01000065.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100064, whole genome shotgun sequence 313
NZ_LPXO01000066.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100065, whole genome shotgun sequence 309
NZ_LPXO01000067.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100066, whole genome shotgun sequence 299
NZ_LPXO01000068.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100067, whole genome shotgun sequence 297
NZ_LPXO01000069.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100068, whole genome shotgun sequence 297
NZ_LPXO01000070.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100069, whole genome shotgun sequence 295
NZ_LPXO01000071.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100070, whole genome shotgun sequence 295
NZ_LPXO01000072.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100071, whole genome shotgun sequence 293
NZ_LPXO01000073.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100072, whole genome shotgun sequence 293
NZ_LPXO01000074.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100073, whole genome shotgun sequence 293
NZ_LPXO01000075.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100074, whole genome shotgun sequence 292
NZ_LPXO01000076.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100075, whole genome shotgun sequence 291
NZ_LPXO01000077.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100076, whole genome shotgun sequence 291
NZ_LPXO01000078.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100077, whole genome shotgun sequence 289
NZ_LPXO01000079.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100078, whole genome shotgun sequence 288
NZ_LPXO01000080.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100079, whole genome shotgun sequence 250
NZ_LPXO01000081.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100080, whole genome shotgun sequence 287
NZ_LPXO01000082.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100081, whole genome shotgun sequence 281
NZ_LPXO01000083.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100082, whole genome shotgun sequence 280
NZ_LPXO01000084.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100083, whole genome shotgun sequence 279
NZ_LPXO01000085.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100084, whole genome shotgun sequence 278
NZ_LPXO01000086.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100085, whole genome shotgun sequence 278
NZ_LPXO01000087.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100086, whole genome shotgun sequence 278
NZ_LPXO01000088.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100087, whole genome shotgun sequence 276
NZ_LPXO01000089.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100088, whole genome shotgun sequence 275
NZ_LPXO01000090.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100089, whole genome shotgun sequence 275
NZ_LPXO01000091.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100090, whole genome shotgun sequence 275
NZ_LPXO01000092.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100091, whole genome shotgun sequence 274
NZ_LPXO01000093.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100092, whole genome shotgun sequence 274
NZ_LPXO01000094.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100093, whole genome shotgun sequence 253
NZ_LPXO01000095.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100094, whole genome shotgun sequence 273
NZ_LPXO01000096.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100095, whole genome shotgun sequence 270
NZ_LPXO01000097.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100096, whole genome shotgun sequence 270
NZ_LPXO01000098.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100097, whole genome shotgun sequence 270
NZ_LPXO01000099.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100098, whole genome shotgun sequence 233
NZ_LPXO01000100.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100099, whole genome shotgun sequence 265
NZ_LPXO01000101.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100100, whole genome shotgun sequence 264
NZ_LPXO01000102.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100101, whole genome shotgun sequence 263
NZ_LPXO01000103.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100102, whole genome shotgun sequence 263
NZ_LPXO01000104.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100103, whole genome shotgun sequence 262
NZ_LPXO01000105.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100104, whole genome shotgun sequence 228
NZ_LPXO01000106.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100105, whole genome shotgun sequence 261
NZ_LPXO01000107.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100106, whole genome shotgun sequence 258
NZ_LPXO01000108.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100107, whole genome shotgun sequence 258
NZ_LPXO01000109.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100108, whole genome shotgun sequence 255
NZ_LPXO01000110.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100109, whole genome shotgun sequence 255
NZ_LPXO01000111.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100110, whole genome shotgun sequence 252
NZ_LPXO01000112.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100111, whole genome shotgun sequence 251
NZ_LPXO01000113.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100112, whole genome shotgun sequence 251
NZ_LPXO01000114.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100113, whole genome shotgun sequence 250
NZ_LPXO01000115.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100114, whole genome shotgun sequence 221
NZ_LPXO01000116.1 Pseudoponticoccus marisrubri strain SJ5A-1 ZB100115, whole genome shotgun sequence 222

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory