fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bittarella massiliensis GD6

Genome identifier: GCF_001486165.1

NCBI assembly name: Bittarella massiliensis

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Bittarella, Bittarella massiliensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Bittarella (ex Durand et al. 2017), Bittarella massiliensis

Scaffolds: 9

Genes: 2,660 Protein-coding: 2,569 RNAs: 71 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LN908969.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 1,144
NZ_LN908970.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 1,157
NZ_LN908971.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 1,462
NZ_LN908972.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 871
NZ_LN908973.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 4,362
NZ_LN908974.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 84,915
NZ_LN908975.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 680,219
NZ_LN908976.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 741,548
NZ_LN908977.1 Bittarella massiliensis (ex Durand et al. 2017) strain GD6, whole genome shotgun sequence 1,291,299

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory