fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sneathia sanguinegens CCUG41628

Genome identifier: GCF_001517935.1

NCBI assembly name: ASM151793v1

GTDB taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Leptotrichiaceae, Sneathia, Sneathia sanguinegens

NCBI taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Leptotrichiaceae, Sneathia, Sneathia sanguinegens

Scaffolds: 32

Genes: 1,276 Protein-coding: 1,212 RNAs: 48 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LOQF01000001.1 Sneathia sanguinegens strain CCUG41628 contig_6, whole genome shotgun sequence 195,159
NZ_LOQF01000002.1 Sneathia sanguinegens strain CCUG41628 contig_5, whole genome shotgun sequence 182,205
NZ_LOQF01000003.1 Sneathia sanguinegens strain CCUG41628 contig_19, whole genome shotgun sequence 134,258
NZ_LOQF01000004.1 Sneathia sanguinegens strain CCUG41628 contig_1, whole genome shotgun sequence 114,047
NZ_LOQF01000005.1 Sneathia sanguinegens strain CCUG41628 contig_10, whole genome shotgun sequence 88,000
NZ_LOQF01000006.1 Sneathia sanguinegens strain CCUG41628 contig_12, whole genome shotgun sequence 88,000
NZ_LOQF01000007.1 Sneathia sanguinegens strain CCUG41628 contig_51, whole genome shotgun sequence 75,578
NZ_LOQF01000008.1 Sneathia sanguinegens strain CCUG41628 contig_11, whole genome shotgun sequence 65,775
NZ_LOQF01000009.1 Sneathia sanguinegens strain CCUG41628 contig_9, whole genome shotgun sequence 65,493
NZ_LOQF01000010.1 Sneathia sanguinegens strain CCUG41628 contig_2, whole genome shotgun sequence 62,735
NZ_LOQF01000011.1 Sneathia sanguinegens strain CCUG41628 contig_16, whole genome shotgun sequence 40,982
NZ_LOQF01000012.1 Sneathia sanguinegens strain CCUG41628 contig_17, whole genome shotgun sequence 38,760
NZ_LOQF01000013.1 Sneathia sanguinegens strain CCUG41628 contig_4, whole genome shotgun sequence 30,653
NZ_LOQF01000014.1 Sneathia sanguinegens strain CCUG41628 contig_8, whole genome shotgun sequence 28,134
NZ_LOQF01000015.1 Sneathia sanguinegens strain CCUG41628 contig_3, whole genome shotgun sequence 24,818
NZ_LOQF01000016.1 Sneathia sanguinegens strain CCUG41628 contig_7, whole genome shotgun sequence 23,087
NZ_LOQF01000017.1 Sneathia sanguinegens strain CCUG41628 contig_13, whole genome shotgun sequence 13,272
NZ_LOQF01000018.1 Sneathia sanguinegens strain CCUG41628 contig_25, whole genome shotgun sequence 5,265
NZ_LOQF01000019.1 Sneathia sanguinegens strain CCUG41628 contig_22, whole genome shotgun sequence 3,096
NZ_LOQF01000020.1 Sneathia sanguinegens strain CCUG41628 contig_14, whole genome shotgun sequence 3,084
NZ_LOQF01000021.1 Sneathia sanguinegens strain CCUG41628 contig_24, whole genome shotgun sequence 1,703
NZ_LOQF01000022.1 Sneathia sanguinegens strain CCUG41628 contig_27, whole genome shotgun sequence 1,085
NZ_LOQF01000023.1 Sneathia sanguinegens strain CCUG41628 contig_23, whole genome shotgun sequence 782
NZ_LOQF01000024.1 Sneathia sanguinegens strain CCUG41628 contig_38, whole genome shotgun sequence 756
NZ_LOQF01000025.1 Sneathia sanguinegens strain CCUG41628 contig_44, whole genome shotgun sequence 659
NZ_LOQF01000026.1 Sneathia sanguinegens strain CCUG41628 contig_43, whole genome shotgun sequence 582
NZ_LOQF01000027.1 Sneathia sanguinegens strain CCUG41628 contig_30, whole genome shotgun sequence 580
NZ_LOQF01000028.1 Sneathia sanguinegens strain CCUG41628 contig_29, whole genome shotgun sequence 552
NZ_LOQF01000029.1 Sneathia sanguinegens strain CCUG41628 contig_28, whole genome shotgun sequence 532
NZ_LOQF01000030.1 Sneathia sanguinegens strain CCUG41628 contig_47, whole genome shotgun sequence 495
NZ_LOQF01000031.1 Sneathia sanguinegens strain CCUG41628 contig_48, whole genome shotgun sequence 495
NZ_LOQF01000032.1 Sneathia sanguinegens strain CCUG41628 contig_49, whole genome shotgun sequence 401

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory