fast.genomicscompare 6,575 genera of bacteria & archaea

 

Croceicoccus marinus E4A9

Genome identifier: GCF_001661675.2

NCBI assembly name: ASM166167v2

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Croceicoccus, Croceicoccus marinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Croceicoccus, Croceicoccus marinus

Scaffolds: 3

Genes: 3,916 Protein-coding: 3,761 RNAs: 57 pseudogenes: 98

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP019602.1 Croceicoccus marinus strain E4A9 chromosome, complete genome 3,001,363
NZ_CP019603.1 Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence 761,621
NZ_CP019604.1 Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence 346,204

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory