fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodohalobacter halophilus JZ3C29

Genome identifier: GCF_001715195.1

NCBI assembly name: ASM171519v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Balneolales, Balneolaceae, Rhodohalobacter, Rhodohalobacter halophilus

NCBI taxonomy: Bacteria, Balneolota, Balneolia, Balneolales, Balneolaceae, Rhodohalobacter, Rhodohalobacter halophilus

Scaffolds: 92

Genes: 2,793 Protein-coding: 2,729 RNAs: 45 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MDWE01000001.1 Rhodohalobacter halophilus strain JZ3C29 contig1, whole genome shotgun sequence 173,911
NZ_MDWE01000002.1 Rhodohalobacter halophilus strain JZ3C29 contig2, whole genome shotgun sequence 122,347
NZ_MDWE01000003.1 Rhodohalobacter halophilus strain JZ3C29 contig3, whole genome shotgun sequence 87,405
NZ_MDWE01000004.1 Rhodohalobacter halophilus strain JZ3C29 contig4, whole genome shotgun sequence 47,635
NZ_MDWE01000005.1 Rhodohalobacter halophilus strain JZ3C29 contig5, whole genome shotgun sequence 157,311
NZ_MDWE01000006.1 Rhodohalobacter halophilus strain JZ3C29 contig6, whole genome shotgun sequence 8,333
NZ_MDWE01000007.1 Rhodohalobacter halophilus strain JZ3C29 contig7, whole genome shotgun sequence 131,518
NZ_MDWE01000008.1 Rhodohalobacter halophilus strain JZ3C29 contig8, whole genome shotgun sequence 60,771
NZ_MDWE01000009.1 Rhodohalobacter halophilus strain JZ3C29 contig9, whole genome shotgun sequence 28,082
NZ_MDWE01000010.1 Rhodohalobacter halophilus strain JZ3C29 contig10, whole genome shotgun sequence 5,364
NZ_MDWE01000011.1 Rhodohalobacter halophilus strain JZ3C29 contig11, whole genome shotgun sequence 166,405
NZ_MDWE01000012.1 Rhodohalobacter halophilus strain JZ3C29 contig12, whole genome shotgun sequence 167,391
NZ_MDWE01000013.1 Rhodohalobacter halophilus strain JZ3C29 contig13, whole genome shotgun sequence 29,663
NZ_MDWE01000014.1 Rhodohalobacter halophilus strain JZ3C29 contig14, whole genome shotgun sequence 39,858
NZ_MDWE01000015.1 Rhodohalobacter halophilus strain JZ3C29 contig15, whole genome shotgun sequence 27,637
NZ_MDWE01000016.1 Rhodohalobacter halophilus strain JZ3C29 contig16, whole genome shotgun sequence 123,808
NZ_MDWE01000017.1 Rhodohalobacter halophilus strain JZ3C29 contig17, whole genome shotgun sequence 78,273
NZ_MDWE01000018.1 Rhodohalobacter halophilus strain JZ3C29 contig18, whole genome shotgun sequence 3,420
NZ_MDWE01000019.1 Rhodohalobacter halophilus strain JZ3C29 contig19, whole genome shotgun sequence 49,192
NZ_MDWE01000020.1 Rhodohalobacter halophilus strain JZ3C29 contig20, whole genome shotgun sequence 12,855
NZ_MDWE01000021.1 Rhodohalobacter halophilus strain JZ3C29 contig21, whole genome shotgun sequence 41,776
NZ_MDWE01000022.1 Rhodohalobacter halophilus strain JZ3C29 contig22, whole genome shotgun sequence 128,550
NZ_MDWE01000023.1 Rhodohalobacter halophilus strain JZ3C29 contig23, whole genome shotgun sequence 127,722
NZ_MDWE01000024.1 Rhodohalobacter halophilus strain JZ3C29 contig24, whole genome shotgun sequence 84,288
NZ_MDWE01000025.1 Rhodohalobacter halophilus strain JZ3C29 contig25, whole genome shotgun sequence 39,384
NZ_MDWE01000026.1 Rhodohalobacter halophilus strain JZ3C29 contig26, whole genome shotgun sequence 46,210
NZ_MDWE01000027.1 Rhodohalobacter halophilus strain JZ3C29 contig27, whole genome shotgun sequence 7,317
NZ_MDWE01000028.1 Rhodohalobacter halophilus strain JZ3C29 contig28, whole genome shotgun sequence 3,011
NZ_MDWE01000029.1 Rhodohalobacter halophilus strain JZ3C29 contig29, whole genome shotgun sequence 675
NZ_MDWE01000030.1 Rhodohalobacter halophilus strain JZ3C29 contig30, whole genome shotgun sequence 58,878
NZ_MDWE01000031.1 Rhodohalobacter halophilus strain JZ3C29 contig31, whole genome shotgun sequence 54,419
NZ_MDWE01000032.1 Rhodohalobacter halophilus strain JZ3C29 contig32, whole genome shotgun sequence 1,138
NZ_MDWE01000033.1 Rhodohalobacter halophilus strain JZ3C29 contig33, whole genome shotgun sequence 57,010
NZ_MDWE01000034.1 Rhodohalobacter halophilus strain JZ3C29 contig34, whole genome shotgun sequence 76,175
NZ_MDWE01000035.1 Rhodohalobacter halophilus strain JZ3C29 contig35, whole genome shotgun sequence 20,876
NZ_MDWE01000036.1 Rhodohalobacter halophilus strain JZ3C29 contig36, whole genome shotgun sequence 90,143
NZ_MDWE01000037.1 Rhodohalobacter halophilus strain JZ3C29 contig37, whole genome shotgun sequence 84,325
NZ_MDWE01000038.1 Rhodohalobacter halophilus strain JZ3C29 contig38, whole genome shotgun sequence 1,557
NZ_MDWE01000039.1 Rhodohalobacter halophilus strain JZ3C29 contig39, whole genome shotgun sequence 32,247
NZ_MDWE01000040.1 Rhodohalobacter halophilus strain JZ3C29 contig40, whole genome shotgun sequence 848
NZ_MDWE01000041.1 Rhodohalobacter halophilus strain JZ3C29 contig41, whole genome shotgun sequence 47,732
NZ_MDWE01000042.1 Rhodohalobacter halophilus strain JZ3C29 contig42, whole genome shotgun sequence 80,787
NZ_MDWE01000043.1 Rhodohalobacter halophilus strain JZ3C29 contig43, whole genome shotgun sequence 73,728
NZ_MDWE01000044.1 Rhodohalobacter halophilus strain JZ3C29 contig44, whole genome shotgun sequence 1,120
NZ_MDWE01000045.1 Rhodohalobacter halophilus strain JZ3C29 contig45, whole genome shotgun sequence 56,114
NZ_MDWE01000046.1 Rhodohalobacter halophilus strain JZ3C29 contig46, whole genome shotgun sequence 17,932
NZ_MDWE01000047.1 Rhodohalobacter halophilus strain JZ3C29 contig47, whole genome shotgun sequence 14,223
NZ_MDWE01000048.1 Rhodohalobacter halophilus strain JZ3C29 contig48, whole genome shotgun sequence 9,582
NZ_MDWE01000049.1 Rhodohalobacter halophilus strain JZ3C29 contig49, whole genome shotgun sequence 7,428
NZ_MDWE01000050.1 Rhodohalobacter halophilus strain JZ3C29 contig50, whole genome shotgun sequence 14,631
NZ_MDWE01000051.1 Rhodohalobacter halophilus strain JZ3C29 contig51, whole genome shotgun sequence 17,720
NZ_MDWE01000052.1 Rhodohalobacter halophilus strain JZ3C29 contig52, whole genome shotgun sequence 3,346
NZ_MDWE01000053.1 Rhodohalobacter halophilus strain JZ3C29 contig53, whole genome shotgun sequence 664
NZ_MDWE01000054.1 Rhodohalobacter halophilus strain JZ3C29 contig54, whole genome shotgun sequence 3,370
NZ_MDWE01000055.1 Rhodohalobacter halophilus strain JZ3C29 contig55, whole genome shotgun sequence 1,435
NZ_MDWE01000056.1 Rhodohalobacter halophilus strain JZ3C29 contig56, whole genome shotgun sequence 16,755
NZ_MDWE01000057.1 Rhodohalobacter halophilus strain JZ3C29 contig57, whole genome shotgun sequence 37,986
NZ_MDWE01000058.1 Rhodohalobacter halophilus strain JZ3C29 contig58, whole genome shotgun sequence 34,517
NZ_MDWE01000059.1 Rhodohalobacter halophilus strain JZ3C29 contig59, whole genome shotgun sequence 28,488
NZ_MDWE01000060.1 Rhodohalobacter halophilus strain JZ3C29 contig60, whole genome shotgun sequence 27,406
NZ_MDWE01000061.1 Rhodohalobacter halophilus strain JZ3C29 contig61, whole genome shotgun sequence 24,499
NZ_MDWE01000062.1 Rhodohalobacter halophilus strain JZ3C29 contig62, whole genome shotgun sequence 8,906
NZ_MDWE01000063.1 Rhodohalobacter halophilus strain JZ3C29 contig63, whole genome shotgun sequence 1,757
NZ_MDWE01000064.1 Rhodohalobacter halophilus strain JZ3C29 contig64, whole genome shotgun sequence 6,267
NZ_MDWE01000065.1 Rhodohalobacter halophilus strain JZ3C29 contig65, whole genome shotgun sequence 1,775
NZ_MDWE01000066.1 Rhodohalobacter halophilus strain JZ3C29 contig66, whole genome shotgun sequence 14,869
NZ_MDWE01000067.1 Rhodohalobacter halophilus strain JZ3C29 contig67, whole genome shotgun sequence 13,209
NZ_MDWE01000068.1 Rhodohalobacter halophilus strain JZ3C29 contig68, whole genome shotgun sequence 12,009
NZ_MDWE01000069.1 Rhodohalobacter halophilus strain JZ3C29 contig69, whole genome shotgun sequence 11,843
NZ_MDWE01000070.1 Rhodohalobacter halophilus strain JZ3C29 contig70, whole genome shotgun sequence 6,949
NZ_MDWE01000071.1 Rhodohalobacter halophilus strain JZ3C29 contig71, whole genome shotgun sequence 6,622
NZ_MDWE01000072.1 Rhodohalobacter halophilus strain JZ3C29 contig72, whole genome shotgun sequence 4,536
NZ_MDWE01000073.1 Rhodohalobacter halophilus strain JZ3C29 contig73, whole genome shotgun sequence 870
NZ_MDWE01000074.1 Rhodohalobacter halophilus strain JZ3C29 contig74, whole genome shotgun sequence 4,678
NZ_MDWE01000075.1 Rhodohalobacter halophilus strain JZ3C29 contig75, whole genome shotgun sequence 2,499
NZ_MDWE01000076.1 Rhodohalobacter halophilus strain JZ3C29 contig76, whole genome shotgun sequence 1,241
NZ_MDWE01000077.1 Rhodohalobacter halophilus strain JZ3C29 contig77, whole genome shotgun sequence 3,933
NZ_MDWE01000078.1 Rhodohalobacter halophilus strain JZ3C29 contig78, whole genome shotgun sequence 1,684
NZ_MDWE01000079.1 Rhodohalobacter halophilus strain JZ3C29 contig79, whole genome shotgun sequence 716
NZ_MDWE01000080.1 Rhodohalobacter halophilus strain JZ3C29 contig80, whole genome shotgun sequence 2,841
NZ_MDWE01000081.1 Rhodohalobacter halophilus strain JZ3C29 contig81, whole genome shotgun sequence 2,734
NZ_MDWE01000082.1 Rhodohalobacter halophilus strain JZ3C29 contig82, whole genome shotgun sequence 2,322
NZ_MDWE01000083.1 Rhodohalobacter halophilus strain JZ3C29 contig83, whole genome shotgun sequence 1,744
NZ_MDWE01000084.1 Rhodohalobacter halophilus strain JZ3C29 contig84, whole genome shotgun sequence 1,632
NZ_MDWE01000085.1 Rhodohalobacter halophilus strain JZ3C29 contig85, whole genome shotgun sequence 1,446
NZ_MDWE01000086.1 Rhodohalobacter halophilus strain JZ3C29 contig86, whole genome shotgun sequence 1,414
NZ_MDWE01000087.1 Rhodohalobacter halophilus strain JZ3C29 contig87, whole genome shotgun sequence 1,386
NZ_MDWE01000088.1 Rhodohalobacter halophilus strain JZ3C29 contig88, whole genome shotgun sequence 1,189
NZ_MDWE01000089.1 Rhodohalobacter halophilus strain JZ3C29 contig89, whole genome shotgun sequence 1,168
NZ_MDWE01000090.1 Rhodohalobacter halophilus strain JZ3C29 contig90, whole genome shotgun sequence 1,133
NZ_MDWE01000091.1 Rhodohalobacter halophilus strain JZ3C29 contig91, whole genome shotgun sequence 1,116
NZ_MDWE01000092.1 Rhodohalobacter halophilus strain JZ3C29 contig92, whole genome shotgun sequence 1,043

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory