fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nioella nitratireducens SSW136

Genome identifier: GCF_001879715.1

NCBI assembly name: ASM187971v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Nioella, Nioella nitratireducens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Nioella, Nioella nitratireducens

Scaffolds: 84

Genes: 3,977 Protein-coding: 3,877 RNAs: 49 pseudogenes: 51

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MNBW01000001.1 Nioella nitratireducens strain SSW136 contig1, whole genome shotgun sequence 306,016
NZ_MNBW01000002.1 Nioella nitratireducens strain SSW136 contig2, whole genome shotgun sequence 295,257
NZ_MNBW01000003.1 Nioella nitratireducens strain SSW136 contig3, whole genome shotgun sequence 265,745
NZ_MNBW01000004.1 Nioella nitratireducens strain SSW136 contig4, whole genome shotgun sequence 263,909
NZ_MNBW01000005.1 Nioella nitratireducens strain SSW136 contig5, whole genome shotgun sequence 256,441
NZ_MNBW01000006.1 Nioella nitratireducens strain SSW136 contig6, whole genome shotgun sequence 254,008
NZ_MNBW01000007.1 Nioella nitratireducens strain SSW136 contig7, whole genome shotgun sequence 253,029
NZ_MNBW01000008.1 Nioella nitratireducens strain SSW136 contig8, whole genome shotgun sequence 226,972
NZ_MNBW01000009.1 Nioella nitratireducens strain SSW136 contig9, whole genome shotgun sequence 190,895
NZ_MNBW01000010.1 Nioella nitratireducens strain SSW136 contig10, whole genome shotgun sequence 162,032
NZ_MNBW01000011.1 Nioella nitratireducens strain SSW136 contig11, whole genome shotgun sequence 160,055
NZ_MNBW01000012.1 Nioella nitratireducens strain SSW136 contig12, whole genome shotgun sequence 146,794
NZ_MNBW01000013.1 Nioella nitratireducens strain SSW136 contig13, whole genome shotgun sequence 127,213
NZ_MNBW01000014.1 Nioella nitratireducens strain SSW136 contig14, whole genome shotgun sequence 95,120
NZ_MNBW01000015.1 Nioella nitratireducens strain SSW136 contig15, whole genome shotgun sequence 77,122
NZ_MNBW01000016.1 Nioella nitratireducens strain SSW136 contig16, whole genome shotgun sequence 75,528
NZ_MNBW01000017.1 Nioella nitratireducens strain SSW136 contig17, whole genome shotgun sequence 74,386
NZ_MNBW01000018.1 Nioella nitratireducens strain SSW136 contig18, whole genome shotgun sequence 57,263
NZ_MNBW01000019.1 Nioella nitratireducens strain SSW136 contig19, whole genome shotgun sequence 56,539
NZ_MNBW01000020.1 Nioella nitratireducens strain SSW136 contig20, whole genome shotgun sequence 54,807
NZ_MNBW01000021.1 Nioella nitratireducens strain SSW136 contig21, whole genome shotgun sequence 47,779
NZ_MNBW01000022.1 Nioella nitratireducens strain SSW136 contig22, whole genome shotgun sequence 42,849
NZ_MNBW01000023.1 Nioella nitratireducens strain SSW136 contig23, whole genome shotgun sequence 42,794
NZ_MNBW01000024.1 Nioella nitratireducens strain SSW136 contig24, whole genome shotgun sequence 37,068
NZ_MNBW01000025.1 Nioella nitratireducens strain SSW136 contig25, whole genome shotgun sequence 37,007
NZ_MNBW01000026.1 Nioella nitratireducens strain SSW136 contig26, whole genome shotgun sequence 35,745
NZ_MNBW01000027.1 Nioella nitratireducens strain SSW136 contig27, whole genome shotgun sequence 35,237
NZ_MNBW01000028.1 Nioella nitratireducens strain SSW136 contig28, whole genome shotgun sequence 30,622
NZ_MNBW01000029.1 Nioella nitratireducens strain SSW136 contig29, whole genome shotgun sequence 22,959
NZ_MNBW01000030.1 Nioella nitratireducens strain SSW136 contig30, whole genome shotgun sequence 20,694
NZ_MNBW01000031.1 Nioella nitratireducens strain SSW136 contig31, whole genome shotgun sequence 20,526
NZ_MNBW01000032.1 Nioella nitratireducens strain SSW136 contig32, whole genome shotgun sequence 19,275
NZ_MNBW01000033.1 Nioella nitratireducens strain SSW136 contig33, whole genome shotgun sequence 18,719
NZ_MNBW01000034.1 Nioella nitratireducens strain SSW136 contig34, whole genome shotgun sequence 18,091
NZ_MNBW01000035.1 Nioella nitratireducens strain SSW136 contig35, whole genome shotgun sequence 15,189
NZ_MNBW01000036.1 Nioella nitratireducens strain SSW136 contig36, whole genome shotgun sequence 15,126
NZ_MNBW01000037.1 Nioella nitratireducens strain SSW136 contig37, whole genome shotgun sequence 14,624
NZ_MNBW01000038.1 Nioella nitratireducens strain SSW136 contig38, whole genome shotgun sequence 12,234
NZ_MNBW01000039.1 Nioella nitratireducens strain SSW136 contig39, whole genome shotgun sequence 11,731
NZ_MNBW01000040.1 Nioella nitratireducens strain SSW136 contig40, whole genome shotgun sequence 9,381
NZ_MNBW01000041.1 Nioella nitratireducens strain SSW136 contig41, whole genome shotgun sequence 8,980
NZ_MNBW01000042.1 Nioella nitratireducens strain SSW136 contig42, whole genome shotgun sequence 8,096
NZ_MNBW01000043.1 Nioella nitratireducens strain SSW136 contig43, whole genome shotgun sequence 6,343
NZ_MNBW01000044.1 Nioella nitratireducens strain SSW136 contig44, whole genome shotgun sequence 6,157
NZ_MNBW01000045.1 Nioella nitratireducens strain SSW136 contig45, whole genome shotgun sequence 5,840
NZ_MNBW01000046.1 Nioella nitratireducens strain SSW136 contig46, whole genome shotgun sequence 5,679
NZ_MNBW01000047.1 Nioella nitratireducens strain SSW136 contig47, whole genome shotgun sequence 5,357
NZ_MNBW01000048.1 Nioella nitratireducens strain SSW136 contig48, whole genome shotgun sequence 4,851
NZ_MNBW01000049.1 Nioella nitratireducens strain SSW136 contig49, whole genome shotgun sequence 4,824
NZ_MNBW01000050.1 Nioella nitratireducens strain SSW136 contig50, whole genome shotgun sequence 4,244
NZ_MNBW01000051.1 Nioella nitratireducens strain SSW136 contig51, whole genome shotgun sequence 3,684
NZ_MNBW01000052.1 Nioella nitratireducens strain SSW136 contig52, whole genome shotgun sequence 3,599
NZ_MNBW01000053.1 Nioella nitratireducens strain SSW136 contig53, whole genome shotgun sequence 3,307
NZ_MNBW01000054.1 Nioella nitratireducens strain SSW136 contig54, whole genome shotgun sequence 3,026
NZ_MNBW01000055.1 Nioella nitratireducens strain SSW136 contig55, whole genome shotgun sequence 2,819
NZ_MNBW01000056.1 Nioella nitratireducens strain SSW136 contig56, whole genome shotgun sequence 2,799
NZ_MNBW01000057.1 Nioella nitratireducens strain SSW136 contig57, whole genome shotgun sequence 2,469
NZ_MNBW01000058.1 Nioella nitratireducens strain SSW136 contig58, whole genome shotgun sequence 2,421
NZ_MNBW01000059.1 Nioella nitratireducens strain SSW136 contig59, whole genome shotgun sequence 2,042
NZ_MNBW01000060.1 Nioella nitratireducens strain SSW136 contig60, whole genome shotgun sequence 2,011
NZ_MNBW01000061.1 Nioella nitratireducens strain SSW136 contig61, whole genome shotgun sequence 1,884
NZ_MNBW01000062.1 Nioella nitratireducens strain SSW136 contig62, whole genome shotgun sequence 1,655
NZ_MNBW01000063.1 Nioella nitratireducens strain SSW136 contig63, whole genome shotgun sequence 1,377
NZ_MNBW01000064.1 Nioella nitratireducens strain SSW136 contig64, whole genome shotgun sequence 1,334
NZ_MNBW01000065.1 Nioella nitratireducens strain SSW136 contig65, whole genome shotgun sequence 1,274
NZ_MNBW01000066.1 Nioella nitratireducens strain SSW136 contig66, whole genome shotgun sequence 1,172
NZ_MNBW01000067.1 Nioella nitratireducens strain SSW136 contig67, whole genome shotgun sequence 1,136
NZ_MNBW01000068.1 Nioella nitratireducens strain SSW136 contig68, whole genome shotgun sequence 1,132
NZ_MNBW01000069.1 Nioella nitratireducens strain SSW136 contig69, whole genome shotgun sequence 1,026
NZ_MNBW01000070.1 Nioella nitratireducens strain SSW136 contig70, whole genome shotgun sequence 939
NZ_MNBW01000071.1 Nioella nitratireducens strain SSW136 contig71, whole genome shotgun sequence 831
NZ_MNBW01000072.1 Nioella nitratireducens strain SSW136 contig72, whole genome shotgun sequence 787
NZ_MNBW01000073.1 Nioella nitratireducens strain SSW136 contig73, whole genome shotgun sequence 699
NZ_MNBW01000074.1 Nioella nitratireducens strain SSW136 contig74, whole genome shotgun sequence 644
NZ_MNBW01000075.1 Nioella nitratireducens strain SSW136 contig75, whole genome shotgun sequence 603
NZ_MNBW01000076.1 Nioella nitratireducens strain SSW136 contig76, whole genome shotgun sequence 596
NZ_MNBW01000077.1 Nioella nitratireducens strain SSW136 contig77, whole genome shotgun sequence 544
NZ_MNBW01000078.1 Nioella nitratireducens strain SSW136 contig78, whole genome shotgun sequence 504
NZ_MNBW01000079.1 Nioella nitratireducens strain SSW136 contig79, whole genome shotgun sequence 500
NZ_MNBW01000080.1 Nioella nitratireducens strain SSW136 contig80, whole genome shotgun sequence 355
NZ_MNBW01000081.1 Nioella nitratireducens strain SSW136 contig81, whole genome shotgun sequence 342
NZ_MNBW01000082.1 Nioella nitratireducens strain SSW136 contig82, whole genome shotgun sequence 314
NZ_MNBW01000083.1 Nioella nitratireducens strain SSW136 contig83, whole genome shotgun sequence 259
NZ_MNBW01000084.1 Nioella nitratireducens strain SSW136 contig84, whole genome shotgun sequence 202

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory