fast.genomicscompare 6,575 genera of bacteria & archaea

 

Spirulina major PCC 6313

Genome identifier: GCF_001890765.1

NCBI assembly name: ASM189076v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Spirulinaceae, Spirulina, Spirulina major

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Spirulinales, Spirulinaceae, Spirulina, Spirulina major

Scaffolds: 2

Genes: 4,424 Protein-coding: 4,309 RNAs: 54 pseudogenes: 61

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KV878782.1 Spirulina major PCC 6313 Contig47, whole genome shotgun sequence 55,413
NZ_KV878783.1 Spirulina major PCC 6313 Contig40, whole genome shotgun sequence 4,994,740

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory