fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phormidium_B ambiguum IAM M-71

Genome identifier: GCF_001904725.1

NCBI assembly name: ASM190472v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Phormidiaceae_A, Phormidium_B, Phormidium_B ambiguum

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Oscillatoriales, Oscillatoriaceae, Phormidium, Phormidium ambiguum

Scaffolds: 90

Genes: 6,498 Protein-coding: 6,379 RNAs: 71 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MRCE01000001.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_1, whole genome shotgun sequence 368,687
NZ_MRCE01000002.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_2, whole genome shotgun sequence 338,878
NZ_MRCE01000003.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_3, whole genome shotgun sequence 320,309
NZ_MRCE01000004.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_4, whole genome shotgun sequence 296,225
NZ_MRCE01000005.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_5, whole genome shotgun sequence 285,032
NZ_MRCE01000006.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_6, whole genome shotgun sequence 268,787
NZ_MRCE01000007.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_7, whole genome shotgun sequence 253,514
NZ_MRCE01000008.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_8, whole genome shotgun sequence 235,583
NZ_MRCE01000009.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_9, whole genome shotgun sequence 228,659
NZ_MRCE01000010.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_10, whole genome shotgun sequence 223,396
NZ_MRCE01000011.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_11, whole genome shotgun sequence 220,542
NZ_MRCE01000012.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_12, whole genome shotgun sequence 208,905
NZ_MRCE01000013.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_13, whole genome shotgun sequence 202,986
NZ_MRCE01000014.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_14, whole genome shotgun sequence 200,612
NZ_MRCE01000015.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_15, whole genome shotgun sequence 196,225
NZ_MRCE01000016.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_16, whole genome shotgun sequence 157,204
NZ_MRCE01000017.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_17, whole genome shotgun sequence 154,844
NZ_MRCE01000018.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_18, whole genome shotgun sequence 152,005
NZ_MRCE01000019.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_19, whole genome shotgun sequence 109,341
NZ_MRCE01000020.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_20, whole genome shotgun sequence 104,608
NZ_MRCE01000021.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_21, whole genome shotgun sequence 103,797
NZ_MRCE01000022.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_22, whole genome shotgun sequence 98,778
NZ_MRCE01000023.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_23, whole genome shotgun sequence 96,526
NZ_MRCE01000024.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_24, whole genome shotgun sequence 91,899
NZ_MRCE01000025.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_25, whole genome shotgun sequence 90,902
NZ_MRCE01000026.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_26, whole genome shotgun sequence 86,033
NZ_MRCE01000027.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_27, whole genome shotgun sequence 85,423
NZ_MRCE01000028.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_28, whole genome shotgun sequence 75,727
NZ_MRCE01000029.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_29, whole genome shotgun sequence 74,215
NZ_MRCE01000030.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_30, whole genome shotgun sequence 73,784
NZ_MRCE01000031.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_31, whole genome shotgun sequence 73,595
NZ_MRCE01000032.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_32, whole genome shotgun sequence 71,511
NZ_MRCE01000033.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_33, whole genome shotgun sequence 70,491
NZ_MRCE01000034.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_34, whole genome shotgun sequence 70,138
NZ_MRCE01000035.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_35, whole genome shotgun sequence 69,415
NZ_MRCE01000036.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_36, whole genome shotgun sequence 66,449
NZ_MRCE01000037.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_37, whole genome shotgun sequence 64,314
NZ_MRCE01000038.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_38, whole genome shotgun sequence 63,286
NZ_MRCE01000039.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_39, whole genome shotgun sequence 62,612
NZ_MRCE01000040.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_40, whole genome shotgun sequence 62,600
NZ_MRCE01000041.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_41, whole genome shotgun sequence 61,286
NZ_MRCE01000042.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_42, whole genome shotgun sequence 60,688
NZ_MRCE01000043.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_43, whole genome shotgun sequence 59,646
NZ_MRCE01000044.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_44, whole genome shotgun sequence 56,875
NZ_MRCE01000045.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_45, whole genome shotgun sequence 55,098
NZ_MRCE01000046.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_46, whole genome shotgun sequence 49,272
NZ_MRCE01000047.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_47, whole genome shotgun sequence 48,621
NZ_MRCE01000048.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_48, whole genome shotgun sequence 48,480
NZ_MRCE01000049.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_49, whole genome shotgun sequence 47,939
NZ_MRCE01000050.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_50, whole genome shotgun sequence 47,872
NZ_MRCE01000051.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_51, whole genome shotgun sequence 45,406
NZ_MRCE01000052.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_52, whole genome shotgun sequence 41,913
NZ_MRCE01000053.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_53, whole genome shotgun sequence 41,773
NZ_MRCE01000054.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_54, whole genome shotgun sequence 40,652
NZ_MRCE01000055.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_55, whole genome shotgun sequence 38,317
NZ_MRCE01000056.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_56, whole genome shotgun sequence 37,724
NZ_MRCE01000057.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_57, whole genome shotgun sequence 37,675
NZ_MRCE01000058.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_58, whole genome shotgun sequence 36,266
NZ_MRCE01000059.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_59, whole genome shotgun sequence 32,512
NZ_MRCE01000060.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_60, whole genome shotgun sequence 32,508
NZ_MRCE01000061.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_61, whole genome shotgun sequence 32,058
NZ_MRCE01000062.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_62, whole genome shotgun sequence 30,792
NZ_MRCE01000063.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_63, whole genome shotgun sequence 28,810
NZ_MRCE01000064.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_64, whole genome shotgun sequence 27,428
NZ_MRCE01000065.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_65, whole genome shotgun sequence 26,644
NZ_MRCE01000066.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_66, whole genome shotgun sequence 26,164
NZ_MRCE01000067.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_67, whole genome shotgun sequence 22,142
NZ_MRCE01000068.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_68, whole genome shotgun sequence 18,352
NZ_MRCE01000069.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_69, whole genome shotgun sequence 17,641
NZ_MRCE01000070.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_70, whole genome shotgun sequence 16,002
NZ_MRCE01000071.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_71, whole genome shotgun sequence 15,051
NZ_MRCE01000072.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_72, whole genome shotgun sequence 14,737
NZ_MRCE01000073.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_73, whole genome shotgun sequence 14,035
NZ_MRCE01000074.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_74, whole genome shotgun sequence 13,452
NZ_MRCE01000075.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_75, whole genome shotgun sequence 13,021
NZ_MRCE01000076.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_76, whole genome shotgun sequence 12,291
NZ_MRCE01000077.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_77, whole genome shotgun sequence 11,907
NZ_MRCE01000078.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_78, whole genome shotgun sequence 9,349
NZ_MRCE01000079.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_79, whole genome shotgun sequence 8,954
NZ_MRCE01000080.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_80, whole genome shotgun sequence 8,544
NZ_MRCE01000081.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_81, whole genome shotgun sequence 8,180
NZ_MRCE01000082.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_82, whole genome shotgun sequence 7,200
NZ_MRCE01000083.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_83, whole genome shotgun sequence 6,310
NZ_MRCE01000084.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_84, whole genome shotgun sequence 4,424
NZ_MRCE01000085.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_85, whole genome shotgun sequence 4,237
NZ_MRCE01000086.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_86, whole genome shotgun sequence 3,553
NZ_MRCE01000087.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_87, whole genome shotgun sequence 3,179
NZ_MRCE01000088.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_88, whole genome shotgun sequence 3,013
NZ_MRCE01000089.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_89, whole genome shotgun sequence 2,462
NZ_MRCE01000090.1 Phormidium ambiguum IAM M-71 NIES-2119_Scaffold_90, whole genome shotgun sequence 2,210

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory