fast.genomicscompare 6,575 genera of bacteria & archaea

 

Neptunomonas phycophila CECT 8716

Genome identifier: GCF_001922575.1

NCBI assembly name: ASM192257v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Neptunomonas, Neptunomonas phycophila

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Neptunomonas, Neptunomonas phycophila

Scaffolds: 27

Genes: 3,581 Protein-coding: 3,488 RNAs: 78 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MRCI01000001.1 Neptunomonas phycophila strain CECT 8716 CONTIG1, whole genome shotgun sequence 3,052,931
NZ_MRCI01000002.1 Neptunomonas phycophila strain CECT 8716 CONTIG2, whole genome shotgun sequence 338,167
NZ_MRCI01000003.1 Neptunomonas phycophila strain CECT 8716 CONTIG3, whole genome shotgun sequence 238,093
NZ_MRCI01000004.1 Neptunomonas phycophila strain CECT 8716 CONTIG4, whole genome shotgun sequence 75,636
NZ_MRCI01000005.1 Neptunomonas phycophila strain CECT 8716 CONTIG5, whole genome shotgun sequence 57,218
NZ_MRCI01000006.1 Neptunomonas phycophila strain CECT 8716 CONTIG6, whole genome shotgun sequence 55,678
NZ_MRCI01000007.1 Neptunomonas phycophila strain CECT 8716 CONTIG7, whole genome shotgun sequence 18,792
NZ_MRCI01000008.1 Neptunomonas phycophila strain CECT 8716 CONTIG8, whole genome shotgun sequence 15,960
NZ_MRCI01000009.1 Neptunomonas phycophila strain CECT 8716 CONTIG9, whole genome shotgun sequence 8,777
NZ_MRCI01000010.1 Neptunomonas phycophila strain CECT 8716 CONTIG10, whole genome shotgun sequence 3,195
NZ_MRCI01000011.1 Neptunomonas phycophila strain CECT 8716 CONTIG11, whole genome shotgun sequence 2,137
NZ_MRCI01000012.1 Neptunomonas phycophila strain CECT 8716 CONTIG12, whole genome shotgun sequence 1,589
NZ_MRCI01000013.1 Neptunomonas phycophila strain CECT 8716 CONTIG13, whole genome shotgun sequence 1,390
NZ_MRCI01000014.1 Neptunomonas phycophila strain CECT 8716 CONTIG14, whole genome shotgun sequence 939
NZ_MRCI01000015.1 Neptunomonas phycophila strain CECT 8716 CONTIG15, whole genome shotgun sequence 713
NZ_MRCI01000016.1 Neptunomonas phycophila strain CECT 8716 CONTIG16, whole genome shotgun sequence 675
NZ_MRCI01000017.1 Neptunomonas phycophila strain CECT 8716 CONTIG17, whole genome shotgun sequence 642
NZ_MRCI01000018.1 Neptunomonas phycophila strain CECT 8716 CONTIG18, whole genome shotgun sequence 642
NZ_MRCI01000019.1 Neptunomonas phycophila strain CECT 8716 CONTIG19, whole genome shotgun sequence 579
NZ_MRCI01000020.1 Neptunomonas phycophila strain CECT 8716 CONTIG20, whole genome shotgun sequence 556
NZ_MRCI01000021.1 Neptunomonas phycophila strain CECT 8716 CONTIG21, whole genome shotgun sequence 518
NZ_MRCI01000022.1 Neptunomonas phycophila strain CECT 8716 contig22, whole genome shotgun sequence 444
NZ_MRCI01000023.1 Neptunomonas phycophila strain CECT 8716 Contig23, whole genome shotgun sequence 303
NZ_MRCI01000024.1 Neptunomonas phycophila strain CECT 8716 contig24, whole genome shotgun sequence 297
NZ_MRCI01000025.1 Neptunomonas phycophila strain CECT 8716 contig25, whole genome shotgun sequence 218
NZ_MRCI01000026.1 Neptunomonas phycophila strain CECT 8716 contig26, whole genome shotgun sequence 206
NZ_MRCI01000027.1 Neptunomonas phycophila strain CECT 8716 contig27, whole genome shotgun sequence 204

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory