fast.genomicscompare 6,575 genera of bacteria & archaea

 

Xaviernesmea rhizosphaerae MH17

Genome identifier: GCF_001938945.1

NCBI assembly name: ASM193894v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Xaviernesmea, Xaviernesmea rhizosphaerae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhizobiaceae, Xaviernesmea, Xaviernesmea rhizosphaerae

Scaffolds: 48

Genes: 4,975 Protein-coding: 4,818 RNAs: 57 pseudogenes: 100

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MKIO01000001.1 Xaviernesmea rhizosphaerae strain MH17 C617, whole genome shotgun sequence 585
NZ_MKIO01000002.1 Xaviernesmea rhizosphaerae strain MH17 C623, whole genome shotgun sequence 599
NZ_MKIO01000003.1 Xaviernesmea rhizosphaerae strain MH17 C631, whole genome shotgun sequence 679
NZ_MKIO01000004.1 Xaviernesmea rhizosphaerae strain MH17 C639, whole genome shotgun sequence 770
NZ_MKIO01000005.1 Xaviernesmea rhizosphaerae strain MH17 C683, whole genome shotgun sequence 4,116
NZ_MKIO01000006.1 Xaviernesmea rhizosphaerae strain MH17 C685, whole genome shotgun sequence 4,134
NZ_MKIO01000007.1 Xaviernesmea rhizosphaerae strain MH17 C693, whole genome shotgun sequence 5,864
NZ_MKIO01000008.1 Xaviernesmea rhizosphaerae strain MH17 C705, whole genome shotgun sequence 7,495
NZ_MKIO01000009.1 Xaviernesmea rhizosphaerae strain MH17 C719, whole genome shotgun sequence 10,876
NZ_MKIO01000010.1 Xaviernesmea rhizosphaerae strain MH17 C733, whole genome shotgun sequence 14,313
NZ_MKIO01000011.1 Xaviernesmea rhizosphaerae strain MH17 C739, whole genome shotgun sequence 16,845
NZ_MKIO01000012.1 Xaviernesmea rhizosphaerae strain MH17 C753, whole genome shotgun sequence 21,328
NZ_MKIO01000013.1 Xaviernesmea rhizosphaerae strain MH17 C761, whole genome shotgun sequence 23,980
NZ_MKIO01000014.1 Xaviernesmea rhizosphaerae strain MH17 C767, whole genome shotgun sequence 27,011
NZ_MKIO01000015.1 Xaviernesmea rhizosphaerae strain MH17 C775, whole genome shotgun sequence 32,237
NZ_MKIO01000016.1 Xaviernesmea rhizosphaerae strain MH17 C787, whole genome shotgun sequence 39,761
NZ_MKIO01000017.1 Xaviernesmea rhizosphaerae strain MH17 C851, whole genome shotgun sequence 148,553
NZ_MKIO01000018.1 Xaviernesmea rhizosphaerae strain MH17 C853, whole genome shotgun sequence 149,388
NZ_MKIO01000019.1 Xaviernesmea rhizosphaerae strain MH17 C863, whole genome shotgun sequence 166,818
NZ_MKIO01000020.1 Xaviernesmea rhizosphaerae strain MH17 scaffold1, whole genome shotgun sequence 195,663
NZ_MKIO01000021.1 Xaviernesmea rhizosphaerae strain MH17 scaffold10, whole genome shotgun sequence 560,723
NZ_MKIO01000022.1 Xaviernesmea rhizosphaerae strain MH17 scaffold11, whole genome shotgun sequence 137,097
NZ_MKIO01000023.1 Xaviernesmea rhizosphaerae strain MH17 scaffold12, whole genome shotgun sequence 3,624
NZ_MKIO01000024.1 Xaviernesmea rhizosphaerae strain MH17 scaffold13, whole genome shotgun sequence 292,094
NZ_MKIO01000025.1 Xaviernesmea rhizosphaerae strain MH17 scaffold14, whole genome shotgun sequence 188,353
NZ_MKIO01000026.1 Xaviernesmea rhizosphaerae strain MH17 scaffold15, whole genome shotgun sequence 66,140
NZ_MKIO01000027.1 Xaviernesmea rhizosphaerae strain MH17 scaffold16, whole genome shotgun sequence 237,867
NZ_MKIO01000028.1 Xaviernesmea rhizosphaerae strain MH17 scaffold17, whole genome shotgun sequence 22,698
NZ_MKIO01000029.1 Xaviernesmea rhizosphaerae strain MH17 scaffold18, whole genome shotgun sequence 313,258
NZ_MKIO01000030.1 Xaviernesmea rhizosphaerae strain MH17 scaffold19, whole genome shotgun sequence 214,690
NZ_MKIO01000031.1 Xaviernesmea rhizosphaerae strain MH17 scaffold2, whole genome shotgun sequence 371,415
NZ_MKIO01000032.1 Xaviernesmea rhizosphaerae strain MH17 scaffold20, whole genome shotgun sequence 43,062
NZ_MKIO01000033.1 Xaviernesmea rhizosphaerae strain MH17 scaffold21, whole genome shotgun sequence 227,705
NZ_MKIO01000034.1 Xaviernesmea rhizosphaerae strain MH17 scaffold22, whole genome shotgun sequence 54,272
NZ_MKIO01000035.1 Xaviernesmea rhizosphaerae strain MH17 scaffold23, whole genome shotgun sequence 15,362
NZ_MKIO01000036.1 Xaviernesmea rhizosphaerae strain MH17 scaffold24, whole genome shotgun sequence 30,449
NZ_MKIO01000037.1 Xaviernesmea rhizosphaerae strain MH17 scaffold25, whole genome shotgun sequence 201,963
NZ_MKIO01000038.1 Xaviernesmea rhizosphaerae strain MH17 scaffold26, whole genome shotgun sequence 181,398
NZ_MKIO01000039.1 Xaviernesmea rhizosphaerae strain MH17 scaffold27, whole genome shotgun sequence 301,197
NZ_MKIO01000040.1 Xaviernesmea rhizosphaerae strain MH17 scaffold28, whole genome shotgun sequence 359,596
NZ_MKIO01000041.1 Xaviernesmea rhizosphaerae strain MH17 scaffold29, whole genome shotgun sequence 405,456
NZ_MKIO01000042.1 Xaviernesmea rhizosphaerae strain MH17 scaffold3, whole genome shotgun sequence 104,302
NZ_MKIO01000043.1 Xaviernesmea rhizosphaerae strain MH17 scaffold4, whole genome shotgun sequence 5,311
NZ_MKIO01000044.1 Xaviernesmea rhizosphaerae strain MH17 scaffold5, whole genome shotgun sequence 3,961
NZ_MKIO01000045.1 Xaviernesmea rhizosphaerae strain MH17 scaffold6, whole genome shotgun sequence 26,079
NZ_MKIO01000046.1 Xaviernesmea rhizosphaerae strain MH17 scaffold7, whole genome shotgun sequence 772
NZ_MKIO01000047.1 Xaviernesmea rhizosphaerae strain MH17 scaffold8, whole genome shotgun sequence 152,465
NZ_MKIO01000048.1 Xaviernesmea rhizosphaerae strain MH17 scaffold9, whole genome shotgun sequence 144,902

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory