fast.genomicscompare 6,575 genera of bacteria & archaea

 

Paludisphaera borealis PX4

Genome identifier: GCF_001956985.1

NCBI assembly name: ASM195698v1

GTDB taxonomy: Bacteria, Planctomycetota, Planctomycetia, Isosphaerales, Isosphaeraceae, Paludisphaera, Paludisphaera borealis

NCBI taxonomy: Bacteria, Planctomycetota, Planctomycetia, Isosphaerales, Isosphaeraceae, Paludisphaera, Paludisphaera borealis

Scaffolds: 3

Genes: 5,887 Protein-coding: 5,776 RNAs: 85 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP019082.1 Paludisphaera borealis strain PX4 chromosome, complete genome 7,497,544
NZ_CP019083.1 Paludisphaera borealis strain PX4 plasmid PALBO1, complete sequence 111,833
NZ_CP019084.1 Paludisphaera borealis strain PX4 plasmid PALBO2, complete sequence 42,519

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory