fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bombella intestini R-52487

Genome identifier: GCF_002003665.1

NCBI assembly name: ASM200366v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Bombella, Bombella intestini

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Bombella, Bombella intestini

Scaffolds: 12

Genes: 1,855 Protein-coding: 1,791 RNAs: 57 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JATM01000001.1 Bombella intestini strain R-52487 R-52487_3, whole genome shotgun sequence 670,913
NZ_JATM01000002.1 Bombella intestini strain R-52487 R-52487_5, whole genome shotgun sequence 376,854
NZ_JATM01000003.1 Bombella intestini strain R-52487 R-52487_4, whole genome shotgun sequence 372,128
NZ_JATM01000004.1 Bombella intestini strain R-52487 R-52487_2, whole genome shotgun sequence 280,455
NZ_JATM01000005.1 Bombella intestini strain R-52487 R-52487_1, whole genome shotgun sequence 182,107
NZ_JATM01000006.1 Bombella intestini strain R-52487 R-52487_7, whole genome shotgun sequence 78,482
NZ_JATM01000007.1 Bombella intestini strain R-52487 R-52487_9, whole genome shotgun sequence 37,273
NZ_JATM01000008.1 Bombella intestini strain R-52487 R-52487_10, whole genome shotgun sequence 10,547
NZ_JATM01000009.1 Bombella intestini strain R-52487 R-52487_6, whole genome shotgun sequence 5,570
NZ_JATM01000010.1 Bombella intestini strain R-52487 R-52487_8, whole genome shotgun sequence 5,374
NZ_JATM01000011.1 Bombella intestini strain R-52487 R-52487_11, whole genome shotgun sequence 2,071
NZ_JATM01000012.1 Bombella intestini strain R-52487 R-52487_12, whole genome shotgun sequence 1,402

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory