fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylocaldum sp002005105 14B

Genome identifier: GCF_002005105.1

NCBI assembly name: 14B

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylocaldum, Methylocaldum sp002005105

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylocaldum

Scaffolds: 85

Genes: 5,071 Protein-coding: 4,960 RNAs: 56 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MSCV01000001.1 Methylocaldum sp. 14B contig00001, whole genome shotgun sequence 294,260
NZ_MSCV01000002.1 Methylocaldum sp. 14B contig00002, whole genome shotgun sequence 230,313
NZ_MSCV01000003.1 Methylocaldum sp. 14B contig00003, whole genome shotgun sequence 225,282
NZ_MSCV01000004.1 Methylocaldum sp. 14B contig00004, whole genome shotgun sequence 214,679
NZ_MSCV01000005.1 Methylocaldum sp. 14B contig00005, whole genome shotgun sequence 212,301
NZ_MSCV01000006.1 Methylocaldum sp. 14B contig00006, whole genome shotgun sequence 204,688
NZ_MSCV01000007.1 Methylocaldum sp. 14B contig00007, whole genome shotgun sequence 183,841
NZ_MSCV01000008.1 Methylocaldum sp. 14B contig00008, whole genome shotgun sequence 182,716
NZ_MSCV01000009.1 Methylocaldum sp. 14B contig00009, whole genome shotgun sequence 174,484
NZ_MSCV01000010.1 Methylocaldum sp. 14B contig00010, whole genome shotgun sequence 164,450
NZ_MSCV01000011.1 Methylocaldum sp. 14B contig00011, whole genome shotgun sequence 160,239
NZ_MSCV01000012.1 Methylocaldum sp. 14B contig00012, whole genome shotgun sequence 151,313
NZ_MSCV01000013.1 Methylocaldum sp. 14B contig00013, whole genome shotgun sequence 151,312
NZ_MSCV01000014.1 Methylocaldum sp. 14B contig00014, whole genome shotgun sequence 134,657
NZ_MSCV01000015.1 Methylocaldum sp. 14B contig00015, whole genome shotgun sequence 133,347
NZ_MSCV01000016.1 Methylocaldum sp. 14B contig00016, whole genome shotgun sequence 131,381
NZ_MSCV01000017.1 Methylocaldum sp. 14B contig00017, whole genome shotgun sequence 116,242
NZ_MSCV01000018.1 Methylocaldum sp. 14B contig00018, whole genome shotgun sequence 111,682
NZ_MSCV01000019.1 Methylocaldum sp. 14B contig00019, whole genome shotgun sequence 107,321
NZ_MSCV01000020.1 Methylocaldum sp. 14B contig00020, whole genome shotgun sequence 106,228
NZ_MSCV01000021.1 Methylocaldum sp. 14B contig00021, whole genome shotgun sequence 101,875
NZ_MSCV01000022.1 Methylocaldum sp. 14B contig00022, whole genome shotgun sequence 94,506
NZ_MSCV01000023.1 Methylocaldum sp. 14B contig00023, whole genome shotgun sequence 93,537
NZ_MSCV01000024.1 Methylocaldum sp. 14B contig00024, whole genome shotgun sequence 92,545
NZ_MSCV01000025.1 Methylocaldum sp. 14B contig00025, whole genome shotgun sequence 92,335
NZ_MSCV01000026.1 Methylocaldum sp. 14B contig00026, whole genome shotgun sequence 88,765
NZ_MSCV01000027.1 Methylocaldum sp. 14B contig00027, whole genome shotgun sequence 88,634
NZ_MSCV01000028.1 Methylocaldum sp. 14B contig00028, whole genome shotgun sequence 85,996
NZ_MSCV01000029.1 Methylocaldum sp. 14B contig00029, whole genome shotgun sequence 77,265
NZ_MSCV01000030.1 Methylocaldum sp. 14B contig00030, whole genome shotgun sequence 76,985
NZ_MSCV01000031.1 Methylocaldum sp. 14B contig00031, whole genome shotgun sequence 76,577
NZ_MSCV01000032.1 Methylocaldum sp. 14B contig00032, whole genome shotgun sequence 75,736
NZ_MSCV01000033.1 Methylocaldum sp. 14B contig00033, whole genome shotgun sequence 75,371
NZ_MSCV01000034.1 Methylocaldum sp. 14B contig00034, whole genome shotgun sequence 72,759
NZ_MSCV01000035.1 Methylocaldum sp. 14B contig00035, whole genome shotgun sequence 70,056
NZ_MSCV01000036.1 Methylocaldum sp. 14B contig00036, whole genome shotgun sequence 68,648
NZ_MSCV01000037.1 Methylocaldum sp. 14B contig00037, whole genome shotgun sequence 67,800
NZ_MSCV01000038.1 Methylocaldum sp. 14B contig00038, whole genome shotgun sequence 66,795
NZ_MSCV01000039.1 Methylocaldum sp. 14B contig00039, whole genome shotgun sequence 65,347
NZ_MSCV01000040.1 Methylocaldum sp. 14B contig00040, whole genome shotgun sequence 64,591
NZ_MSCV01000041.1 Methylocaldum sp. 14B contig00041, whole genome shotgun sequence 63,336
NZ_MSCV01000042.1 Methylocaldum sp. 14B contig00042, whole genome shotgun sequence 58,123
NZ_MSCV01000043.1 Methylocaldum sp. 14B contig00043, whole genome shotgun sequence 57,124
NZ_MSCV01000044.1 Methylocaldum sp. 14B contig00044, whole genome shotgun sequence 51,109
NZ_MSCV01000045.1 Methylocaldum sp. 14B contig00045, whole genome shotgun sequence 45,801
NZ_MSCV01000046.1 Methylocaldum sp. 14B contig00046, whole genome shotgun sequence 45,365
NZ_MSCV01000047.1 Methylocaldum sp. 14B contig00047, whole genome shotgun sequence 43,019
NZ_MSCV01000048.1 Methylocaldum sp. 14B contig00048, whole genome shotgun sequence 36,540
NZ_MSCV01000049.1 Methylocaldum sp. 14B contig00049, whole genome shotgun sequence 30,431
NZ_MSCV01000050.1 Methylocaldum sp. 14B contig00050, whole genome shotgun sequence 24,779
NZ_MSCV01000051.1 Methylocaldum sp. 14B contig00051, whole genome shotgun sequence 23,189
NZ_MSCV01000052.1 Methylocaldum sp. 14B contig00052, whole genome shotgun sequence 19,892
NZ_MSCV01000053.1 Methylocaldum sp. 14B contig00053, whole genome shotgun sequence 17,404
NZ_MSCV01000054.1 Methylocaldum sp. 14B contig00054, whole genome shotgun sequence 15,974
NZ_MSCV01000055.1 Methylocaldum sp. 14B contig00055, whole genome shotgun sequence 12,925
NZ_MSCV01000056.1 Methylocaldum sp. 14B contig00056, whole genome shotgun sequence 9,918
NZ_MSCV01000057.1 Methylocaldum sp. 14B contig00057, whole genome shotgun sequence 9,290
NZ_MSCV01000058.1 Methylocaldum sp. 14B contig00058, whole genome shotgun sequence 8,767
NZ_MSCV01000059.1 Methylocaldum sp. 14B contig00059, whole genome shotgun sequence 8,574
NZ_MSCV01000060.1 Methylocaldum sp. 14B contig00060, whole genome shotgun sequence 7,879
NZ_MSCV01000061.1 Methylocaldum sp. 14B contig00061, whole genome shotgun sequence 5,893
NZ_MSCV01000062.1 Methylocaldum sp. 14B contig00062, whole genome shotgun sequence 4,093
NZ_MSCV01000063.1 Methylocaldum sp. 14B contig00063, whole genome shotgun sequence 4,025
NZ_MSCV01000064.1 Methylocaldum sp. 14B contig00064, whole genome shotgun sequence 3,658
NZ_MSCV01000065.1 Methylocaldum sp. 14B contig00065, whole genome shotgun sequence 3,348
NZ_MSCV01000066.1 Methylocaldum sp. 14B contig00066, whole genome shotgun sequence 3,081
NZ_MSCV01000067.1 Methylocaldum sp. 14B contig00067, whole genome shotgun sequence 3,037
NZ_MSCV01000068.1 Methylocaldum sp. 14B contig00068, whole genome shotgun sequence 2,571
NZ_MSCV01000069.1 Methylocaldum sp. 14B contig00069, whole genome shotgun sequence 2,067
NZ_MSCV01000070.1 Methylocaldum sp. 14B contig00070, whole genome shotgun sequence 1,186
NZ_MSCV01000071.1 Methylocaldum sp. 14B contig00071, whole genome shotgun sequence 1,176
NZ_MSCV01000072.1 Methylocaldum sp. 14B contig00072, whole genome shotgun sequence 1,112
NZ_MSCV01000073.1 Methylocaldum sp. 14B contig00073, whole genome shotgun sequence 1,083
NZ_MSCV01000074.1 Methylocaldum sp. 14B contig00074, whole genome shotgun sequence 985
NZ_MSCV01000075.1 Methylocaldum sp. 14B contig00075, whole genome shotgun sequence 943
NZ_MSCV01000076.1 Methylocaldum sp. 14B contig00076, whole genome shotgun sequence 940
NZ_MSCV01000077.1 Methylocaldum sp. 14B contig00077, whole genome shotgun sequence 915
NZ_MSCV01000078.1 Methylocaldum sp. 14B contig00078, whole genome shotgun sequence 846
NZ_MSCV01000079.1 Methylocaldum sp. 14B contig00079, whole genome shotgun sequence 763
NZ_MSCV01000080.1 Methylocaldum sp. 14B contig00080, whole genome shotgun sequence 696
NZ_MSCV01000081.1 Methylocaldum sp. 14B contig00081, whole genome shotgun sequence 565
NZ_MSCV01000082.1 Methylocaldum sp. 14B contig00082, whole genome shotgun sequence 562
NZ_MSCV01000083.1 Methylocaldum sp. 14B contig00083, whole genome shotgun sequence 557
NZ_MSCV01000084.1 Methylocaldum sp. 14B contig00084, whole genome shotgun sequence 522
NZ_MSCV01000085.1 Methylocaldum sp. 14B contig00085, whole genome shotgun sequence 516

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory