fast.genomicscompare 6,575 genera of bacteria & archaea

 

Martelella mediterranea MACL11

Genome identifier: GCF_002043005.1

NCBI assembly name: ASM204300v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Martelella, Martelella mediterranea

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Martelella, Martelella mediterranea

Scaffolds: 4

Genes: 5,310 Protein-coding: 5,141 RNAs: 58 pseudogenes: 111

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP020330.1 Martelella mediterranea DSM 17316 strain MACL11 chromosome, complete genome 4,671,477
NZ_CP020331.1 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 593,079
NZ_CP020332.1 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM259, complete sequence 258,597
NZ_CP020333.1 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence 169,914

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory