fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marispirochaeta aestuarii JC444

Genome identifier: GCF_002087085.1

NCBI assembly name: ASM208708v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, JC444, Marispirochaetaceae, Marispirochaeta, Marispirochaeta aestuarii

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Spirochaetales, Spirochaetaceae, Marispirochaeta, Marispirochaeta aestuarii

Scaffolds: 79

Genes: 3,857 Protein-coding: 3,789 RNAs: 54 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MWQY01000001.1 Marispirochaeta aestuarii strain JC444 Contig1, whole genome shotgun sequence 325,439
NZ_MWQY01000002.1 Marispirochaeta aestuarii strain JC444 Contig2, whole genome shotgun sequence 323,105
NZ_MWQY01000003.1 Marispirochaeta aestuarii strain JC444 Contig3, whole genome shotgun sequence 275,387
NZ_MWQY01000004.1 Marispirochaeta aestuarii strain JC444 Contig4, whole genome shotgun sequence 219,511
NZ_MWQY01000005.1 Marispirochaeta aestuarii strain JC444 Contig5, whole genome shotgun sequence 216,610
NZ_MWQY01000006.1 Marispirochaeta aestuarii strain JC444 Contig6, whole genome shotgun sequence 216,258
NZ_MWQY01000007.1 Marispirochaeta aestuarii strain JC444 Contig7, whole genome shotgun sequence 203,164
NZ_MWQY01000008.1 Marispirochaeta aestuarii strain JC444 Contig8, whole genome shotgun sequence 198,250
NZ_MWQY01000009.1 Marispirochaeta aestuarii strain JC444 Contig9, whole genome shotgun sequence 190,557
NZ_MWQY01000010.1 Marispirochaeta aestuarii strain JC444 Contig10, whole genome shotgun sequence 185,921
NZ_MWQY01000011.1 Marispirochaeta aestuarii strain JC444 Contig11, whole genome shotgun sequence 180,301
NZ_MWQY01000012.1 Marispirochaeta aestuarii strain JC444 Contig12, whole genome shotgun sequence 163,418
NZ_MWQY01000013.1 Marispirochaeta aestuarii strain JC444 Contig13, whole genome shotgun sequence 138,261
NZ_MWQY01000014.1 Marispirochaeta aestuarii strain JC444 Contig14, whole genome shotgun sequence 117,692
NZ_MWQY01000015.1 Marispirochaeta aestuarii strain JC444 Contig15, whole genome shotgun sequence 108,797
NZ_MWQY01000016.1 Marispirochaeta aestuarii strain JC444 Contig16, whole genome shotgun sequence 100,221
NZ_MWQY01000017.1 Marispirochaeta aestuarii strain JC444 Contig17, whole genome shotgun sequence 100,096
NZ_MWQY01000018.1 Marispirochaeta aestuarii strain JC444 Contig18, whole genome shotgun sequence 90,897
NZ_MWQY01000019.1 Marispirochaeta aestuarii strain JC444 Contig19, whole genome shotgun sequence 72,767
NZ_MWQY01000020.1 Marispirochaeta aestuarii strain JC444 Contig20, whole genome shotgun sequence 67,973
NZ_MWQY01000021.1 Marispirochaeta aestuarii strain JC444 Contig21, whole genome shotgun sequence 64,230
NZ_MWQY01000022.1 Marispirochaeta aestuarii strain JC444 Contig22, whole genome shotgun sequence 57,831
NZ_MWQY01000023.1 Marispirochaeta aestuarii strain JC444 Contig23, whole genome shotgun sequence 57,455
NZ_MWQY01000024.1 Marispirochaeta aestuarii strain JC444 Contig24, whole genome shotgun sequence 53,847
NZ_MWQY01000025.1 Marispirochaeta aestuarii strain JC444 Contig25, whole genome shotgun sequence 52,664
NZ_MWQY01000026.1 Marispirochaeta aestuarii strain JC444 Contig26, whole genome shotgun sequence 52,157
NZ_MWQY01000027.1 Marispirochaeta aestuarii strain JC444 Contig27, whole genome shotgun sequence 48,217
NZ_MWQY01000028.1 Marispirochaeta aestuarii strain JC444 Contig28, whole genome shotgun sequence 43,292
NZ_MWQY01000029.1 Marispirochaeta aestuarii strain JC444 Contig29, whole genome shotgun sequence 29,924
NZ_MWQY01000030.1 Marispirochaeta aestuarii strain JC444 Contig30, whole genome shotgun sequence 27,317
NZ_MWQY01000031.1 Marispirochaeta aestuarii strain JC444 Contig31, whole genome shotgun sequence 25,565
NZ_MWQY01000032.1 Marispirochaeta aestuarii strain JC444 Contig32, whole genome shotgun sequence 22,188
NZ_MWQY01000033.1 Marispirochaeta aestuarii strain JC444 Contig33, whole genome shotgun sequence 20,904
NZ_MWQY01000034.1 Marispirochaeta aestuarii strain JC444 Contig34, whole genome shotgun sequence 20,885
NZ_MWQY01000035.1 Marispirochaeta aestuarii strain JC444 Contig35, whole genome shotgun sequence 18,185
NZ_MWQY01000036.1 Marispirochaeta aestuarii strain JC444 Contig36, whole genome shotgun sequence 17,441
NZ_MWQY01000037.1 Marispirochaeta aestuarii strain JC444 Contig37, whole genome shotgun sequence 12,622
NZ_MWQY01000038.1 Marispirochaeta aestuarii strain JC444 Contig38, whole genome shotgun sequence 12,471
NZ_MWQY01000039.1 Marispirochaeta aestuarii strain JC444 Contig39, whole genome shotgun sequence 12,163
NZ_MWQY01000040.1 Marispirochaeta aestuarii strain JC444 Contig40, whole genome shotgun sequence 7,434
NZ_MWQY01000041.1 Marispirochaeta aestuarii strain JC444 Contig41, whole genome shotgun sequence 5,575
NZ_MWQY01000042.1 Marispirochaeta aestuarii strain JC444 Contig42, whole genome shotgun sequence 5,339
NZ_MWQY01000043.1 Marispirochaeta aestuarii strain JC444 Contig43, whole genome shotgun sequence 5,240
NZ_MWQY01000044.1 Marispirochaeta aestuarii strain JC444 Contig44, whole genome shotgun sequence 4,595
NZ_MWQY01000045.1 Marispirochaeta aestuarii strain JC444 Contig45, whole genome shotgun sequence 3,891
NZ_MWQY01000046.1 Marispirochaeta aestuarii strain JC444 Contig46, whole genome shotgun sequence 3,743
NZ_MWQY01000047.1 Marispirochaeta aestuarii strain JC444 Contig47, whole genome shotgun sequence 3,602
NZ_MWQY01000048.1 Marispirochaeta aestuarii strain JC444 Contig48, whole genome shotgun sequence 2,677
NZ_MWQY01000049.1 Marispirochaeta aestuarii strain JC444 Contig49, whole genome shotgun sequence 2,392
NZ_MWQY01000050.1 Marispirochaeta aestuarii strain JC444 Contig50, whole genome shotgun sequence 2,328
NZ_MWQY01000051.1 Marispirochaeta aestuarii strain JC444 Contig51, whole genome shotgun sequence 2,019
NZ_MWQY01000052.1 Marispirochaeta aestuarii strain JC444 Contig52, whole genome shotgun sequence 1,979
NZ_MWQY01000053.1 Marispirochaeta aestuarii strain JC444 Contig53, whole genome shotgun sequence 1,727
NZ_MWQY01000054.1 Marispirochaeta aestuarii strain JC444 Contig54, whole genome shotgun sequence 1,696
NZ_MWQY01000055.1 Marispirochaeta aestuarii strain JC444 Contig55, whole genome shotgun sequence 1,681
NZ_MWQY01000056.1 Marispirochaeta aestuarii strain JC444 Contig56, whole genome shotgun sequence 1,543
NZ_MWQY01000057.1 Marispirochaeta aestuarii strain JC444 Contig57, whole genome shotgun sequence 1,448
NZ_MWQY01000058.1 Marispirochaeta aestuarii strain JC444 Contig58, whole genome shotgun sequence 1,325
NZ_MWQY01000059.1 Marispirochaeta aestuarii strain JC444 Contig59, whole genome shotgun sequence 1,322
NZ_MWQY01000060.1 Marispirochaeta aestuarii strain JC444 Contig61, whole genome shotgun sequence 1,082
NZ_MWQY01000061.1 Marispirochaeta aestuarii strain JC444 Contig63, whole genome shotgun sequence 1,008
NZ_MWQY01000062.1 Marispirochaeta aestuarii strain JC444 Contig64, whole genome shotgun sequence 804
NZ_MWQY01000063.1 Marispirochaeta aestuarii strain JC444 Contig65, whole genome shotgun sequence 769
NZ_MWQY01000064.1 Marispirochaeta aestuarii strain JC444 Contig66, whole genome shotgun sequence 769
NZ_MWQY01000065.1 Marispirochaeta aestuarii strain JC444 Contig67, whole genome shotgun sequence 680
NZ_MWQY01000066.1 Marispirochaeta aestuarii strain JC444 Contig68, whole genome shotgun sequence 678
NZ_MWQY01000067.1 Marispirochaeta aestuarii strain JC444 Contig69, whole genome shotgun sequence 673
NZ_MWQY01000068.1 Marispirochaeta aestuarii strain JC444 Contig70, whole genome shotgun sequence 558
NZ_MWQY01000069.1 Marispirochaeta aestuarii strain JC444 Contig72, whole genome shotgun sequence 432
NZ_MWQY01000070.1 Marispirochaeta aestuarii strain JC444 Contig73, whole genome shotgun sequence 428
NZ_MWQY01000071.1 Marispirochaeta aestuarii strain JC444 Contig74, whole genome shotgun sequence 426
NZ_MWQY01000072.1 Marispirochaeta aestuarii strain JC444 Contig75, whole genome shotgun sequence 408
NZ_MWQY01000073.1 Marispirochaeta aestuarii strain JC444 Contig76, whole genome shotgun sequence 374
NZ_MWQY01000074.1 Marispirochaeta aestuarii strain JC444 Contig77, whole genome shotgun sequence 366
NZ_MWQY01000075.1 Marispirochaeta aestuarii strain JC444 Contig78, whole genome shotgun sequence 361
NZ_MWQY01000076.1 Marispirochaeta aestuarii strain JC444 Contig79, whole genome shotgun sequence 357
NZ_MWQY01000077.1 Marispirochaeta aestuarii strain JC444 Contig80, whole genome shotgun sequence 338
NZ_MWQY01000078.1 Marispirochaeta aestuarii strain JC444 Contig81, whole genome shotgun sequence 325
NZ_MWQY01000079.1 Marispirochaeta aestuarii strain JC444 Contig82, whole genome shotgun sequence 310

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory