fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudomonas_M indica NBRC 103045

Genome identifier: GCF_002091635.1

NCBI assembly name: ASM209163v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas_M, Pseudomonas_M indica

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas, Pseudomonas indica

Scaffolds: 62

Genes: 5,278 Protein-coding: 5,153 RNAs: 61 pseudogenes: 64

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BDAC01000001.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 579,303
NZ_BDAC01000002.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 469,980
NZ_BDAC01000003.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 345,154
NZ_BDAC01000004.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 335,141
NZ_BDAC01000005.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 316,304
NZ_BDAC01000006.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 253,141
NZ_BDAC01000007.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 248,528
NZ_BDAC01000008.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 243,269
NZ_BDAC01000009.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 213,923
NZ_BDAC01000010.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 197,526
NZ_BDAC01000011.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 196,546
NZ_BDAC01000012.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 189,313
NZ_BDAC01000013.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 177,080
NZ_BDAC01000014.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 172,392
NZ_BDAC01000015.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 71,679
NZ_BDAC01000016.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 97,485
NZ_BDAC01000017.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 142,301
NZ_BDAC01000018.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 137,750
NZ_BDAC01000019.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 134,434
NZ_BDAC01000020.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 118,296
NZ_BDAC01000021.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 113,049
NZ_BDAC01000022.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 85,236
NZ_BDAC01000023.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 84,083
NZ_BDAC01000024.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 83,823
NZ_BDAC01000025.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 78,546
NZ_BDAC01000026.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 75,104
NZ_BDAC01000027.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 55,214
NZ_BDAC01000028.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 14,216
NZ_BDAC01000029.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 62,109
NZ_BDAC01000030.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 61,593
NZ_BDAC01000031.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 52,040
NZ_BDAC01000032.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 51,551
NZ_BDAC01000033.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 50,321
NZ_BDAC01000034.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 48,679
NZ_BDAC01000035.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 45,634
NZ_BDAC01000036.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 31,910
NZ_BDAC01000037.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 23,506
NZ_BDAC01000038.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 22,918
NZ_BDAC01000039.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 18,148
NZ_BDAC01000040.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 16,388
NZ_BDAC01000041.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 13,886
NZ_BDAC01000042.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 11,589
NZ_BDAC01000043.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 7,758
NZ_BDAC01000044.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 6,965
NZ_BDAC01000045.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 6,749
NZ_BDAC01000046.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 5,644
NZ_BDAC01000047.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 3,057
NZ_BDAC01000048.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 2,422
NZ_BDAC01000049.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 2,276
NZ_BDAC01000050.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 2,053
NZ_BDAC01000051.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,296
NZ_BDAC01000052.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,239
NZ_BDAC01000053.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,225
NZ_BDAC01000054.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,202
NZ_BDAC01000055.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,189
NZ_BDAC01000056.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 1,183
NZ_BDAC01000057.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 922
NZ_BDAC01000058.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 915
NZ_BDAC01000059.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 840
NZ_BDAC01000060.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 731
NZ_BDAC01000061.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 571
NZ_BDAC01000062.1 Pseudomonas indica NBRC 103045, whole genome shotgun sequence 556

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory