fast.genomicscompare 6,575 genera of bacteria & archaea

 

Salibaculum halophilum WDS1C4

Genome identifier: GCF_002094885.1

NCBI assembly name: ASM209488v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Salibaculum, Salibaculum halophilum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Salibaculum, Salibaculum halophilum

Scaffolds: 66

Genes: 2,952 Protein-coding: 2,863 RNAs: 49 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MSIT01000001.1 Salibaculum halophilum strain WDS1C4 contig1, whole genome shotgun sequence 309,687
NZ_MSIT01000002.1 Salibaculum halophilum strain WDS1C4 contig2, whole genome shotgun sequence 292,956
NZ_MSIT01000003.1 Salibaculum halophilum strain WDS1C4 contig3, whole genome shotgun sequence 280,633
NZ_MSIT01000004.1 Salibaculum halophilum strain WDS1C4 contig4, whole genome shotgun sequence 11,330
NZ_MSIT01000005.1 Salibaculum halophilum strain WDS1C4 contig5, whole genome shotgun sequence 28,646
NZ_MSIT01000006.1 Salibaculum halophilum strain WDS1C4 contig6, whole genome shotgun sequence 214,961
NZ_MSIT01000007.1 Salibaculum halophilum strain WDS1C4 contig7, whole genome shotgun sequence 229,140
NZ_MSIT01000008.1 Salibaculum halophilum strain WDS1C4 contig8, whole genome shotgun sequence 187,959
NZ_MSIT01000009.1 Salibaculum halophilum strain WDS1C4 contig9, whole genome shotgun sequence 134,630
NZ_MSIT01000010.1 Salibaculum halophilum strain WDS1C4 contig10, whole genome shotgun sequence 121,576
NZ_MSIT01000011.1 Salibaculum halophilum strain WDS1C4 contig11, whole genome shotgun sequence 92,632
NZ_MSIT01000012.1 Salibaculum halophilum strain WDS1C4 contig12, whole genome shotgun sequence 92,493
NZ_MSIT01000013.1 Salibaculum halophilum strain WDS1C4 contig13, whole genome shotgun sequence 72,697
NZ_MSIT01000014.1 Salibaculum halophilum strain WDS1C4 contig14, whole genome shotgun sequence 69,160
NZ_MSIT01000015.1 Salibaculum halophilum strain WDS1C4 contig15, whole genome shotgun sequence 56,574
NZ_MSIT01000016.1 Salibaculum halophilum strain WDS1C4 contig16, whole genome shotgun sequence 56,267
NZ_MSIT01000017.1 Salibaculum halophilum strain WDS1C4 contig17, whole genome shotgun sequence 42,739
NZ_MSIT01000018.1 Salibaculum halophilum strain WDS1C4 contig18, whole genome shotgun sequence 41,181
NZ_MSIT01000019.1 Salibaculum halophilum strain WDS1C4 contig19, whole genome shotgun sequence 11,283
NZ_MSIT01000020.1 Salibaculum halophilum strain WDS1C4 contig20, whole genome shotgun sequence 29,018
NZ_MSIT01000021.1 Salibaculum halophilum strain WDS1C4 contig21, whole genome shotgun sequence 40,136
NZ_MSIT01000022.1 Salibaculum halophilum strain WDS1C4 contig22, whole genome shotgun sequence 34,961
NZ_MSIT01000023.1 Salibaculum halophilum strain WDS1C4 contig23, whole genome shotgun sequence 33,952
NZ_MSIT01000024.1 Salibaculum halophilum strain WDS1C4 contig24, whole genome shotgun sequence 24,198
NZ_MSIT01000025.1 Salibaculum halophilum strain WDS1C4 contig25, whole genome shotgun sequence 9,089
NZ_MSIT01000026.1 Salibaculum halophilum strain WDS1C4 contig26, whole genome shotgun sequence 30,169
NZ_MSIT01000027.1 Salibaculum halophilum strain WDS1C4 contig27, whole genome shotgun sequence 29,656
NZ_MSIT01000028.1 Salibaculum halophilum strain WDS1C4 contig28, whole genome shotgun sequence 28,753
NZ_MSIT01000029.1 Salibaculum halophilum strain WDS1C4 contig29, whole genome shotgun sequence 27,490
NZ_MSIT01000030.1 Salibaculum halophilum strain WDS1C4 contig30, whole genome shotgun sequence 815
NZ_MSIT01000031.1 Salibaculum halophilum strain WDS1C4 contig31, whole genome shotgun sequence 28,340
NZ_MSIT01000032.1 Salibaculum halophilum strain WDS1C4 contig32, whole genome shotgun sequence 22,065
NZ_MSIT01000033.1 Salibaculum halophilum strain WDS1C4 contig33, whole genome shotgun sequence 21,295
NZ_MSIT01000034.1 Salibaculum halophilum strain WDS1C4 contig34, whole genome shotgun sequence 20,698
NZ_MSIT01000035.1 Salibaculum halophilum strain WDS1C4 contig35, whole genome shotgun sequence 19,756
NZ_MSIT01000036.1 Salibaculum halophilum strain WDS1C4 contig36, whole genome shotgun sequence 17,979
NZ_MSIT01000037.1 Salibaculum halophilum strain WDS1C4 contig37, whole genome shotgun sequence 16,685
NZ_MSIT01000038.1 Salibaculum halophilum strain WDS1C4 contig38, whole genome shotgun sequence 16,618
NZ_MSIT01000039.1 Salibaculum halophilum strain WDS1C4 contig39, whole genome shotgun sequence 9,585
NZ_MSIT01000040.1 Salibaculum halophilum strain WDS1C4 contig40, whole genome shotgun sequence 6,509
NZ_MSIT01000041.1 Salibaculum halophilum strain WDS1C4 contig41, whole genome shotgun sequence 11,381
NZ_MSIT01000042.1 Salibaculum halophilum strain WDS1C4 contig42, whole genome shotgun sequence 1,492
NZ_MSIT01000043.1 Salibaculum halophilum strain WDS1C4 contig43, whole genome shotgun sequence 1,155
NZ_MSIT01000044.1 Salibaculum halophilum strain WDS1C4 contig44, whole genome shotgun sequence 7,084
NZ_MSIT01000045.1 Salibaculum halophilum strain WDS1C4 contig45, whole genome shotgun sequence 10,596
NZ_MSIT01000046.1 Salibaculum halophilum strain WDS1C4 contig46, whole genome shotgun sequence 8,969
NZ_MSIT01000047.1 Salibaculum halophilum strain WDS1C4 contig47, whole genome shotgun sequence 8,180
NZ_MSIT01000048.1 Salibaculum halophilum strain WDS1C4 contig48, whole genome shotgun sequence 7,353
NZ_MSIT01000049.1 Salibaculum halophilum strain WDS1C4 contig49, whole genome shotgun sequence 7,315
NZ_MSIT01000050.1 Salibaculum halophilum strain WDS1C4 contig50, whole genome shotgun sequence 6,554
NZ_MSIT01000051.1 Salibaculum halophilum strain WDS1C4 contig51, whole genome shotgun sequence 5,220
NZ_MSIT01000052.1 Salibaculum halophilum strain WDS1C4 contig52, whole genome shotgun sequence 2,766
NZ_MSIT01000053.1 Salibaculum halophilum strain WDS1C4 contig53, whole genome shotgun sequence 926
NZ_MSIT01000054.1 Salibaculum halophilum strain WDS1C4 contig54, whole genome shotgun sequence 3,053
NZ_MSIT01000055.1 Salibaculum halophilum strain WDS1C4 contig55, whole genome shotgun sequence 2,582
NZ_MSIT01000056.1 Salibaculum halophilum strain WDS1C4 contig56, whole genome shotgun sequence 2,321
NZ_MSIT01000057.1 Salibaculum halophilum strain WDS1C4 contig57, whole genome shotgun sequence 2,276
NZ_MSIT01000058.1 Salibaculum halophilum strain WDS1C4 contig58, whole genome shotgun sequence 2,115
NZ_MSIT01000059.1 Salibaculum halophilum strain WDS1C4 contig59, whole genome shotgun sequence 1,941
NZ_MSIT01000060.1 Salibaculum halophilum strain WDS1C4 contig60, whole genome shotgun sequence 1,446
NZ_MSIT01000061.1 Salibaculum halophilum strain WDS1C4 contig61, whole genome shotgun sequence 1,395
NZ_MSIT01000062.1 Salibaculum halophilum strain WDS1C4 contig62, whole genome shotgun sequence 1,261
NZ_MSIT01000063.1 Salibaculum halophilum strain WDS1C4 contig63, whole genome shotgun sequence 1,182
NZ_MSIT01000064.1 Salibaculum halophilum strain WDS1C4 contig64, whole genome shotgun sequence 1,179
NZ_MSIT01000065.1 Salibaculum halophilum strain WDS1C4 contig65, whole genome shotgun sequence 1,063
NZ_MSIT01000066.1 Salibaculum halophilum strain WDS1C4 contig66, whole genome shotgun sequence 1,014

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory