fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pelagibacter sp002101295 RS40

Genome identifier: GCF_002101295.1

NCBI assembly name: ASM210129v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Pelagibacterales, Pelagibacteraceae, Pelagibacter, Pelagibacter sp002101295

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Candidatus Pelagibacterales, Pelagibacteraceae, Candidatus Pelagibacter

Scaffolds: 1

Genes: 1,441 Protein-coding: 1,400 RNAs: 38 pseudogenes: 3

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP020778.1 Candidatus Pelagibacter sp. RS40 chromosome 1,378,905

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory