fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_E sp002151445 KC8

Genome identifier: GCF_002151445.1

NCBI assembly name: ASM215144v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_E, Sphingomonas_E sp002151445

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas

Scaffolds: 1

Genes: 3,962 Protein-coding: 3,871 RNAs: 58 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP016306.1 Sphingomonas sp. KC8 chromosome, complete genome 4,123,013

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory