fast.genomicscompare 6,575 genera of bacteria & archaea

 

Agarilytica rhodophyticola 017

Genome identifier: GCF_002157225.2

NCBI assembly name: ASM215722v2

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, Agarilytica, Agarilytica rhodophyticola

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Cellvibrionaceae, Agarilytica, Agarilytica rhodophyticola

Scaffolds: 4

Genes: 5,860 Protein-coding: 5,753 RNAs: 87 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP020038.1 Agarilytica rhodophyticola strain 017 chromosome, complete genome 6,878,829
NZ_CP021745.1 Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence 131,784
NZ_CP021746.1 Agarilytica rhodophyticola strain 017 plasmid pSU2, complete sequence 71,672
NZ_CP021747.1 Agarilytica rhodophyticola strain 017 plasmid pSU3, complete sequence 31,527

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory