fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caccocola sp002159945 An23

Genome identifier: GCF_002159945.1

NCBI assembly name: ASM215994v1

GTDB taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Synergistaceae, Caccocola, Caccocola sp002159945

NCBI taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Synergistaceae, Cloacibacillus

Scaffolds: 31

Genes: 2,806 Protein-coding: 2,731 RNAs: 54 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NFJQ01000001.1 Cloacibacillus sp. An23 An23_contig_1, whole genome shotgun sequence 324,971
NZ_NFJQ01000002.1 Cloacibacillus sp. An23 An23_contig_2, whole genome shotgun sequence 314,981
NZ_NFJQ01000003.1 Cloacibacillus sp. An23 An23_contig_3, whole genome shotgun sequence 270,491
NZ_NFJQ01000004.1 Cloacibacillus sp. An23 An23_contig_4, whole genome shotgun sequence 266,622
NZ_NFJQ01000005.1 Cloacibacillus sp. An23 An23_contig_5, whole genome shotgun sequence 236,194
NZ_NFJQ01000006.1 Cloacibacillus sp. An23 An23_contig_6, whole genome shotgun sequence 213,006
NZ_NFJQ01000007.1 Cloacibacillus sp. An23 An23_contig_7, whole genome shotgun sequence 206,391
NZ_NFJQ01000008.1 Cloacibacillus sp. An23 An23_contig_8, whole genome shotgun sequence 192,062
NZ_NFJQ01000009.1 Cloacibacillus sp. An23 An23_contig_9, whole genome shotgun sequence 165,686
NZ_NFJQ01000010.1 Cloacibacillus sp. An23 An23_contig_10, whole genome shotgun sequence 148,483
NZ_NFJQ01000011.1 Cloacibacillus sp. An23 An23_contig_11, whole genome shotgun sequence 141,640
NZ_NFJQ01000012.1 Cloacibacillus sp. An23 An23_contig_12, whole genome shotgun sequence 136,081
NZ_NFJQ01000013.1 Cloacibacillus sp. An23 An23_contig_13, whole genome shotgun sequence 70,495
NZ_NFJQ01000014.1 Cloacibacillus sp. An23 An23_contig_14, whole genome shotgun sequence 60,519
NZ_NFJQ01000015.1 Cloacibacillus sp. An23 An23_contig_15, whole genome shotgun sequence 48,554
NZ_NFJQ01000016.1 Cloacibacillus sp. An23 An23_contig_16, whole genome shotgun sequence 47,596
NZ_NFJQ01000017.1 Cloacibacillus sp. An23 An23_contig_17, whole genome shotgun sequence 6,996
NZ_NFJQ01000018.1 Cloacibacillus sp. An23 An23_contig_18, whole genome shotgun sequence 5,993
NZ_NFJQ01000019.1 Cloacibacillus sp. An23 An23_contig_19, whole genome shotgun sequence 5,584
NZ_NFJQ01000020.1 Cloacibacillus sp. An23 An23_contig_20, whole genome shotgun sequence 5,096
NZ_NFJQ01000021.1 Cloacibacillus sp. An23 An23_contig_21, whole genome shotgun sequence 5,029
NZ_NFJQ01000022.1 Cloacibacillus sp. An23 An23_contig_22, whole genome shotgun sequence 4,606
NZ_NFJQ01000023.1 Cloacibacillus sp. An23 An23_contig_23, whole genome shotgun sequence 4,153
NZ_NFJQ01000024.1 Cloacibacillus sp. An23 An23_contig_24, whole genome shotgun sequence 3,955
NZ_NFJQ01000025.1 Cloacibacillus sp. An23 An23_contig_25, whole genome shotgun sequence 3,827
NZ_NFJQ01000026.1 Cloacibacillus sp. An23 An23_contig_26, whole genome shotgun sequence 1,760
NZ_NFJQ01000027.1 Cloacibacillus sp. An23 An23_contig_27, whole genome shotgun sequence 1,756
NZ_NFJQ01000028.1 Cloacibacillus sp. An23 An23_contig_28, whole genome shotgun sequence 1,305
NZ_NFJQ01000029.1 Cloacibacillus sp. An23 An23_contig_29, whole genome shotgun sequence 681
NZ_NFJQ01000030.1 Cloacibacillus sp. An23 An23_contig_30, whole genome shotgun sequence 511
NZ_NFJQ01000031.1 Cloacibacillus sp. An23 An23_contig_31, whole genome shotgun sequence 502

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory