fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hominiventricola avistercoris An196

Genome identifier: GCF_002160135.1

NCBI assembly name: ASM216013v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Hominiventricola, Hominiventricola avistercoris

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Lachnoclostridium

Scaffolds: 31

Genes: 3,241 Protein-coding: 3,125 RNAs: 59 pseudogenes: 57

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NFJZ01000001.1 Lachnoclostridium sp. An196 An196_contig_1, whole genome shotgun sequence 494,276
NZ_NFJZ01000002.1 Lachnoclostridium sp. An196 An196_contig_2, whole genome shotgun sequence 430,546
NZ_NFJZ01000003.1 Lachnoclostridium sp. An196 An196_contig_3, whole genome shotgun sequence 267,589
NZ_NFJZ01000004.1 Lachnoclostridium sp. An196 An196_contig_4, whole genome shotgun sequence 246,800
NZ_NFJZ01000005.1 Lachnoclostridium sp. An196 An196_contig_5, whole genome shotgun sequence 242,137
NZ_NFJZ01000006.1 Lachnoclostridium sp. An196 An196_contig_6, whole genome shotgun sequence 210,285
NZ_NFJZ01000007.1 Lachnoclostridium sp. An196 An196_contig_7, whole genome shotgun sequence 195,747
NZ_NFJZ01000008.1 Lachnoclostridium sp. An196 An196_contig_8, whole genome shotgun sequence 176,004
NZ_NFJZ01000009.1 Lachnoclostridium sp. An196 An196_contig_9, whole genome shotgun sequence 160,149
NZ_NFJZ01000010.1 Lachnoclostridium sp. An196 An196_contig_10, whole genome shotgun sequence 148,997
NZ_NFJZ01000011.1 Lachnoclostridium sp. An196 An196_contig_11, whole genome shotgun sequence 137,681
NZ_NFJZ01000012.1 Lachnoclostridium sp. An196 An196_contig_12, whole genome shotgun sequence 93,805
NZ_NFJZ01000013.1 Lachnoclostridium sp. An196 An196_contig_13, whole genome shotgun sequence 85,662
NZ_NFJZ01000014.1 Lachnoclostridium sp. An196 An196_contig_14, whole genome shotgun sequence 66,686
NZ_NFJZ01000015.1 Lachnoclostridium sp. An196 An196_contig_15, whole genome shotgun sequence 56,574
NZ_NFJZ01000016.1 Lachnoclostridium sp. An196 An196_contig_16, whole genome shotgun sequence 55,865
NZ_NFJZ01000017.1 Lachnoclostridium sp. An196 An196_contig_17, whole genome shotgun sequence 47,763
NZ_NFJZ01000018.1 Lachnoclostridium sp. An196 An196_contig_18, whole genome shotgun sequence 37,300
NZ_NFJZ01000019.1 Lachnoclostridium sp. An196 An196_contig_19, whole genome shotgun sequence 33,473
NZ_NFJZ01000020.1 Lachnoclostridium sp. An196 An196_contig_20, whole genome shotgun sequence 28,141
NZ_NFJZ01000021.1 Lachnoclostridium sp. An196 An196_contig_21, whole genome shotgun sequence 12,393
NZ_NFJZ01000022.1 Lachnoclostridium sp. An196 An196_contig_22, whole genome shotgun sequence 7,762
NZ_NFJZ01000023.1 Lachnoclostridium sp. An196 An196_contig_23, whole genome shotgun sequence 7,506
NZ_NFJZ01000024.1 Lachnoclostridium sp. An196 An196_contig_24, whole genome shotgun sequence 1,925
NZ_NFJZ01000025.1 Lachnoclostridium sp. An196 An196_contig_25, whole genome shotgun sequence 1,568
NZ_NFJZ01000026.1 Lachnoclostridium sp. An196 An196_contig_26, whole genome shotgun sequence 1,537
NZ_NFJZ01000027.1 Lachnoclostridium sp. An196 An196_contig_27, whole genome shotgun sequence 1,272
NZ_NFJZ01000028.1 Lachnoclostridium sp. An196 An196_contig_28, whole genome shotgun sequence 976
NZ_NFJZ01000029.1 Lachnoclostridium sp. An196 An196_contig_29, whole genome shotgun sequence 804
NZ_NFJZ01000030.1 Lachnoclostridium sp. An196 An196_contig_30, whole genome shotgun sequence 768
NZ_NFJZ01000031.1 Lachnoclostridium sp. An196 An196_contig_31, whole genome shotgun sequence 631

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory