fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gemmiger_A avium An120

Genome identifier: GCF_002160955.1

NCBI assembly name: ASM216095v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Gemmiger_A, Gemmiger_A avium

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Gemmiger

Scaffolds: 51

Genes: 3,219 Protein-coding: 3,095 RNAs: 74 pseudogenes: 50

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NFLN01000001.1 Gemmiger sp. An120 An120_contig_1, whole genome shotgun sequence 388,439
NZ_NFLN01000002.1 Gemmiger sp. An120 An120_contig_2, whole genome shotgun sequence 332,993
NZ_NFLN01000003.1 Gemmiger sp. An120 An120_contig_3, whole genome shotgun sequence 298,356
NZ_NFLN01000004.1 Gemmiger sp. An120 An120_contig_4, whole genome shotgun sequence 238,566
NZ_NFLN01000005.1 Gemmiger sp. An120 An120_contig_5, whole genome shotgun sequence 181,142
NZ_NFLN01000006.1 Gemmiger sp. An120 An120_contig_6, whole genome shotgun sequence 169,580
NZ_NFLN01000007.1 Gemmiger sp. An120 An120_contig_7, whole genome shotgun sequence 141,989
NZ_NFLN01000008.1 Gemmiger sp. An120 An120_contig_8, whole genome shotgun sequence 136,975
NZ_NFLN01000009.1 Gemmiger sp. An120 An120_contig_9, whole genome shotgun sequence 136,137
NZ_NFLN01000010.1 Gemmiger sp. An120 An120_contig_10, whole genome shotgun sequence 126,928
NZ_NFLN01000011.1 Gemmiger sp. An120 An120_contig_11, whole genome shotgun sequence 106,083
NZ_NFLN01000012.1 Gemmiger sp. An120 An120_contig_12, whole genome shotgun sequence 94,658
NZ_NFLN01000013.1 Gemmiger sp. An120 An120_contig_13, whole genome shotgun sequence 94,570
NZ_NFLN01000014.1 Gemmiger sp. An120 An120_contig_14, whole genome shotgun sequence 75,739
NZ_NFLN01000015.1 Gemmiger sp. An120 An120_contig_15, whole genome shotgun sequence 65,216
NZ_NFLN01000016.1 Gemmiger sp. An120 An120_contig_16, whole genome shotgun sequence 61,667
NZ_NFLN01000017.1 Gemmiger sp. An120 An120_contig_17, whole genome shotgun sequence 61,646
NZ_NFLN01000018.1 Gemmiger sp. An120 An120_contig_18, whole genome shotgun sequence 58,976
NZ_NFLN01000019.1 Gemmiger sp. An120 An120_contig_19, whole genome shotgun sequence 57,616
NZ_NFLN01000020.1 Gemmiger sp. An120 An120_contig_20, whole genome shotgun sequence 48,687
NZ_NFLN01000021.1 Gemmiger sp. An120 An120_contig_21, whole genome shotgun sequence 44,832
NZ_NFLN01000022.1 Gemmiger sp. An120 An120_contig_22, whole genome shotgun sequence 42,149
NZ_NFLN01000023.1 Gemmiger sp. An120 An120_contig_23, whole genome shotgun sequence 36,058
NZ_NFLN01000024.1 Gemmiger sp. An120 An120_contig_24, whole genome shotgun sequence 35,738
NZ_NFLN01000025.1 Gemmiger sp. An120 An120_contig_25, whole genome shotgun sequence 35,684
NZ_NFLN01000026.1 Gemmiger sp. An120 An120_contig_26, whole genome shotgun sequence 35,516
NZ_NFLN01000027.1 Gemmiger sp. An120 An120_contig_27, whole genome shotgun sequence 33,052
NZ_NFLN01000028.1 Gemmiger sp. An120 An120_contig_28, whole genome shotgun sequence 29,531
NZ_NFLN01000029.1 Gemmiger sp. An120 An120_contig_29, whole genome shotgun sequence 26,920
NZ_NFLN01000030.1 Gemmiger sp. An120 An120_contig_30, whole genome shotgun sequence 26,040
NZ_NFLN01000031.1 Gemmiger sp. An120 An120_contig_31, whole genome shotgun sequence 24,282
NZ_NFLN01000032.1 Gemmiger sp. An120 An120_contig_32, whole genome shotgun sequence 22,362
NZ_NFLN01000033.1 Gemmiger sp. An120 An120_contig_33, whole genome shotgun sequence 19,519
NZ_NFLN01000034.1 Gemmiger sp. An120 An120_contig_34, whole genome shotgun sequence 18,132
NZ_NFLN01000035.1 Gemmiger sp. An120 An120_contig_35, whole genome shotgun sequence 16,589
NZ_NFLN01000036.1 Gemmiger sp. An120 An120_contig_36, whole genome shotgun sequence 15,525
NZ_NFLN01000037.1 Gemmiger sp. An120 An120_contig_37, whole genome shotgun sequence 13,784
NZ_NFLN01000038.1 Gemmiger sp. An120 An120_contig_38, whole genome shotgun sequence 12,650
NZ_NFLN01000039.1 Gemmiger sp. An120 An120_contig_39, whole genome shotgun sequence 11,868
NZ_NFLN01000040.1 Gemmiger sp. An120 An120_contig_40, whole genome shotgun sequence 8,838
NZ_NFLN01000041.1 Gemmiger sp. An120 An120_contig_41, whole genome shotgun sequence 2,400
NZ_NFLN01000042.1 Gemmiger sp. An120 An120_contig_42, whole genome shotgun sequence 1,249
NZ_NFLN01000043.1 Gemmiger sp. An120 An120_contig_43, whole genome shotgun sequence 998
NZ_NFLN01000044.1 Gemmiger sp. An120 An120_contig_44, whole genome shotgun sequence 968
NZ_NFLN01000045.1 Gemmiger sp. An120 An120_contig_45, whole genome shotgun sequence 823
NZ_NFLN01000046.1 Gemmiger sp. An120 An120_contig_46, whole genome shotgun sequence 635
NZ_NFLN01000047.1 Gemmiger sp. An120 An120_contig_47, whole genome shotgun sequence 633
NZ_NFLN01000048.1 Gemmiger sp. An120 An120_contig_48, whole genome shotgun sequence 585
NZ_NFLN01000049.1 Gemmiger sp. An120 An120_contig_49, whole genome shotgun sequence 581
NZ_NFLN01000050.1 Gemmiger sp. An120 An120_contig_50, whole genome shotgun sequence 566
NZ_NFLN01000051.1 Gemmiger sp. An120 An120_contig_51, whole genome shotgun sequence 524

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory