fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinibacterium profundimaris 22II1-22F33

Genome identifier: GCF_002210095.1

NCBI assembly name: ASM221009v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Marinibacterium, Marinibacterium profundimaris

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Marinibacterium, Marinibacterium profundimaris

Scaffolds: 60

Genes: 5,743 Protein-coding: 5,620 RNAs: 52 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AQQR01000001.1 Marinibacterium profundimaris strain 22II1-22F33 contig1, whole genome shotgun sequence 1,058,968
NZ_AQQR01000002.1 Marinibacterium profundimaris strain 22II1-22F33 contig2, whole genome shotgun sequence 719,168
NZ_AQQR01000003.1 Marinibacterium profundimaris strain 22II1-22F33 contig3, whole genome shotgun sequence 656,488
NZ_AQQR01000004.1 Marinibacterium profundimaris strain 22II1-22F33 contig4, whole genome shotgun sequence 556,690
NZ_AQQR01000005.1 Marinibacterium profundimaris strain 22II1-22F33 contig5, whole genome shotgun sequence 343,537
NZ_AQQR01000006.1 Marinibacterium profundimaris strain 22II1-22F33 contig6, whole genome shotgun sequence 281,572
NZ_AQQR01000007.1 Marinibacterium profundimaris strain 22II1-22F33 contig7, whole genome shotgun sequence 219,391
NZ_AQQR01000008.1 Marinibacterium profundimaris strain 22II1-22F33 contig8, whole genome shotgun sequence 188,316
NZ_AQQR01000009.1 Marinibacterium profundimaris strain 22II1-22F33 contig9, whole genome shotgun sequence 158,422
NZ_AQQR01000010.1 Marinibacterium profundimaris strain 22II1-22F33 contig10, whole genome shotgun sequence 148,071
NZ_AQQR01000011.1 Marinibacterium profundimaris strain 22II1-22F33 contig11, whole genome shotgun sequence 144,107
NZ_AQQR01000012.1 Marinibacterium profundimaris strain 22II1-22F33 contig12, whole genome shotgun sequence 137,679
NZ_AQQR01000013.1 Marinibacterium profundimaris strain 22II1-22F33 contig13, whole genome shotgun sequence 108,788
NZ_AQQR01000014.1 Marinibacterium profundimaris strain 22II1-22F33 contig14, whole genome shotgun sequence 107,020
NZ_AQQR01000015.1 Marinibacterium profundimaris strain 22II1-22F33 contig15, whole genome shotgun sequence 94,619
NZ_AQQR01000016.1 Marinibacterium profundimaris strain 22II1-22F33 contig16, whole genome shotgun sequence 82,886
NZ_AQQR01000017.1 Marinibacterium profundimaris strain 22II1-22F33 contig17, whole genome shotgun sequence 81,927
NZ_AQQR01000018.1 Marinibacterium profundimaris strain 22II1-22F33 contig18, whole genome shotgun sequence 73,815
NZ_AQQR01000019.1 Marinibacterium profundimaris strain 22II1-22F33 contig19, whole genome shotgun sequence 73,149
NZ_AQQR01000020.1 Marinibacterium profundimaris strain 22II1-22F33 contig20, whole genome shotgun sequence 70,241
NZ_AQQR01000021.1 Marinibacterium profundimaris strain 22II1-22F33 contig21, whole genome shotgun sequence 60,986
NZ_AQQR01000022.1 Marinibacterium profundimaris strain 22II1-22F33 contig22, whole genome shotgun sequence 57,383
NZ_AQQR01000023.1 Marinibacterium profundimaris strain 22II1-22F33 contig23, whole genome shotgun sequence 57,038
NZ_AQQR01000024.1 Marinibacterium profundimaris strain 22II1-22F33 contig24, whole genome shotgun sequence 56,578
NZ_AQQR01000025.1 Marinibacterium profundimaris strain 22II1-22F33 contig25, whole genome shotgun sequence 54,331
NZ_AQQR01000026.1 Marinibacterium profundimaris strain 22II1-22F33 contig26, whole genome shotgun sequence 54,026
NZ_AQQR01000027.1 Marinibacterium profundimaris strain 22II1-22F33 contig27, whole genome shotgun sequence 49,886
NZ_AQQR01000028.1 Marinibacterium profundimaris strain 22II1-22F33 contig28, whole genome shotgun sequence 47,964
NZ_AQQR01000029.1 Marinibacterium profundimaris strain 22II1-22F33 contig29, whole genome shotgun sequence 44,724
NZ_AQQR01000030.1 Marinibacterium profundimaris strain 22II1-22F33 contig30, whole genome shotgun sequence 35,547
NZ_AQQR01000031.1 Marinibacterium profundimaris strain 22II1-22F33 contig31, whole genome shotgun sequence 35,096
NZ_AQQR01000032.1 Marinibacterium profundimaris strain 22II1-22F33 contig32, whole genome shotgun sequence 33,646
NZ_AQQR01000033.1 Marinibacterium profundimaris strain 22II1-22F33 contig33, whole genome shotgun sequence 33,067
NZ_AQQR01000034.1 Marinibacterium profundimaris strain 22II1-22F33 contig34, whole genome shotgun sequence 32,333
NZ_AQQR01000035.1 Marinibacterium profundimaris strain 22II1-22F33 contig35, whole genome shotgun sequence 20,966
NZ_AQQR01000036.1 Marinibacterium profundimaris strain 22II1-22F33 contig36, whole genome shotgun sequence 20,813
NZ_AQQR01000037.1 Marinibacterium profundimaris strain 22II1-22F33 contig37, whole genome shotgun sequence 17,970
NZ_AQQR01000038.1 Marinibacterium profundimaris strain 22II1-22F33 contig38, whole genome shotgun sequence 16,450
NZ_AQQR01000039.1 Marinibacterium profundimaris strain 22II1-22F33 contig39, whole genome shotgun sequence 14,305
NZ_AQQR01000040.1 Marinibacterium profundimaris strain 22II1-22F33 contig40, whole genome shotgun sequence 13,466
NZ_AQQR01000041.1 Marinibacterium profundimaris strain 22II1-22F33 contig41, whole genome shotgun sequence 12,753
NZ_AQQR01000042.1 Marinibacterium profundimaris strain 22II1-22F33 contig42, whole genome shotgun sequence 12,383
NZ_AQQR01000043.1 Marinibacterium profundimaris strain 22II1-22F33 contig43, whole genome shotgun sequence 12,290
NZ_AQQR01000044.1 Marinibacterium profundimaris strain 22II1-22F33 contig44, whole genome shotgun sequence 9,373
NZ_AQQR01000045.1 Marinibacterium profundimaris strain 22II1-22F33 contig45, whole genome shotgun sequence 6,870
NZ_AQQR01000046.1 Marinibacterium profundimaris strain 22II1-22F33 contig46, whole genome shotgun sequence 6,701
NZ_AQQR01000047.1 Marinibacterium profundimaris strain 22II1-22F33 contig47, whole genome shotgun sequence 5,455
NZ_AQQR01000048.1 Marinibacterium profundimaris strain 22II1-22F33 contig48, whole genome shotgun sequence 4,220
NZ_AQQR01000049.1 Marinibacterium profundimaris strain 22II1-22F33 contig49, whole genome shotgun sequence 3,976
NZ_AQQR01000050.1 Marinibacterium profundimaris strain 22II1-22F33 contig50, whole genome shotgun sequence 3,095
NZ_AQQR01000051.1 Marinibacterium profundimaris strain 22II1-22F33 contig51, whole genome shotgun sequence 2,523
NZ_AQQR01000052.1 Marinibacterium profundimaris strain 22II1-22F33 contig52, whole genome shotgun sequence 2,275
NZ_AQQR01000053.1 Marinibacterium profundimaris strain 22II1-22F33 contig53, whole genome shotgun sequence 1,808
NZ_AQQR01000054.1 Marinibacterium profundimaris strain 22II1-22F33 contig54, whole genome shotgun sequence 1,472
NZ_AQQR01000055.1 Marinibacterium profundimaris strain 22II1-22F33 contig55, whole genome shotgun sequence 1,364
NZ_AQQR01000056.1 Marinibacterium profundimaris strain 22II1-22F33 contig56, whole genome shotgun sequence 1,209
NZ_AQQR01000057.1 Marinibacterium profundimaris strain 22II1-22F33 contig57, whole genome shotgun sequence 1,119
NZ_AQQR01000058.1 Marinibacterium profundimaris strain 22II1-22F33 contig58, whole genome shotgun sequence 706
NZ_AQQR01000059.1 Marinibacterium profundimaris strain 22II1-22F33 contig59, whole genome shotgun sequence 601
NZ_AQQR01000060.1 Marinibacterium profundimaris strain 22II1-22F33 contig60, whole genome shotgun sequence 580

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory