fast.genomicscompare 6,575 genera of bacteria & archaea

 

Elstera cyanobacteriorum TH019

Genome identifier: GCF_002251735.1

NCBI assembly name: ASM225173v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Elsterales, Elsteraceae, Elstera, Elstera cyanobacteriorum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Elstera, Elstera cyanobacteriorum

Scaffolds: 35

Genes: 3,839 Protein-coding: 3,761 RNAs: 55 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NOXS01000001.1 Elstera cyanobacteriorum strain TH019 C461, whole genome shotgun sequence 2,577
NZ_NOXS01000002.1 Elstera cyanobacteriorum strain TH019 C467, whole genome shotgun sequence 3,146
NZ_NOXS01000003.1 Elstera cyanobacteriorum strain TH019 C477, whole genome shotgun sequence 4,357
NZ_NOXS01000004.1 Elstera cyanobacteriorum strain TH019 C473, whole genome shotgun sequence 3,852
NZ_NOXS01000005.1 Elstera cyanobacteriorum strain TH019 C489, whole genome shotgun sequence 7,005
NZ_NOXS01000006.1 Elstera cyanobacteriorum strain TH019 C503, whole genome shotgun sequence 19,683
NZ_NOXS01000007.1 Elstera cyanobacteriorum strain TH019 C459, whole genome shotgun sequence 2,542
NZ_NOXS01000008.1 Elstera cyanobacteriorum strain TH019 C483, whole genome shotgun sequence 4,844
NZ_NOXS01000009.1 Elstera cyanobacteriorum strain TH019 scaffold21, whole genome shotgun sequence 2,406
NZ_NOXS01000010.1 Elstera cyanobacteriorum strain TH019 C511, whole genome shotgun sequence 33,448
NZ_NOXS01000011.1 Elstera cyanobacteriorum strain TH019 scaffold19, whole genome shotgun sequence 8,097
NZ_NOXS01000012.1 Elstera cyanobacteriorum strain TH019 scaffold16, whole genome shotgun sequence 4,209
NZ_NOXS01000013.1 Elstera cyanobacteriorum strain TH019 scaffold14, whole genome shotgun sequence 1,873
NZ_NOXS01000014.1 Elstera cyanobacteriorum strain TH019 C519, whole genome shotgun sequence 44,894
NZ_NOXS01000015.1 Elstera cyanobacteriorum strain TH019 scaffold6, whole genome shotgun sequence 14,297
NZ_NOXS01000016.1 Elstera cyanobacteriorum strain TH019 scaffold7, whole genome shotgun sequence 36,180
NZ_NOXS01000017.1 Elstera cyanobacteriorum strain TH019 C465, whole genome shotgun sequence 3,089
NZ_NOXS01000018.1 Elstera cyanobacteriorum strain TH019 scaffold11, whole genome shotgun sequence 9,270
NZ_NOXS01000019.1 Elstera cyanobacteriorum strain TH019 scaffold5, whole genome shotgun sequence 43,862
NZ_NOXS01000020.1 Elstera cyanobacteriorum strain TH019 C541, whole genome shotgun sequence 104,889
NZ_NOXS01000021.1 Elstera cyanobacteriorum strain TH019 C539, whole genome shotgun sequence 97,719
NZ_NOXS01000022.1 Elstera cyanobacteriorum strain TH019 scaffold13, whole genome shotgun sequence 79,465
NZ_NOXS01000023.1 Elstera cyanobacteriorum strain TH019 scaffold12, whole genome shotgun sequence 22,091
NZ_NOXS01000024.1 Elstera cyanobacteriorum strain TH019 scaffold2, whole genome shotgun sequence 110,599
NZ_NOXS01000025.1 Elstera cyanobacteriorum strain TH019 C551, whole genome shotgun sequence 123,556
NZ_NOXS01000026.1 Elstera cyanobacteriorum strain TH019 scaffold15, whole genome shotgun sequence 102,852
NZ_NOXS01000027.1 Elstera cyanobacteriorum strain TH019 scaffold22, whole genome shotgun sequence 117,765
NZ_NOXS01000028.1 Elstera cyanobacteriorum strain TH019 scaffold3, whole genome shotgun sequence 99,146
NZ_NOXS01000029.1 Elstera cyanobacteriorum strain TH019 scaffold10, whole genome shotgun sequence 167,620
NZ_NOXS01000030.1 Elstera cyanobacteriorum strain TH019 C565, whole genome shotgun sequence 288,358
NZ_NOXS01000031.1 Elstera cyanobacteriorum strain TH019 scaffold9, whole genome shotgun sequence 367,730
NZ_NOXS01000032.1 Elstera cyanobacteriorum strain TH019 scaffold1, whole genome shotgun sequence 605,801
NZ_NOXS01000033.1 Elstera cyanobacteriorum strain TH019 scaffold23, whole genome shotgun sequence 547,736
NZ_NOXS01000034.1 Elstera cyanobacteriorum strain TH019 scaffold8, whole genome shotgun sequence 323,649
NZ_NOXS01000035.1 Elstera cyanobacteriorum strain TH019 scaffold4, whole genome shotgun sequence 541,527

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory