fast.genomicscompare 6,575 genera of bacteria & archaea

 

Petroclostridium xylanilyticum SK-Y3

Genome identifier: GCF_002252565.1

NCBI assembly name: ASM225256v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, SK-Y3, SK-Y3, Petroclostridium, Petroclostridium xylanilyticum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Petroclostridium, Petroclostridium xylanilyticum

Scaffolds: 41

Genes: 3,755 Protein-coding: 3,600 RNAs: 87 pseudogenes: 68

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NPML01000001.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_1, whole genome shotgun sequence 13,266
NZ_NPML01000002.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_2, whole genome shotgun sequence 251,728
NZ_NPML01000003.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_3, whole genome shotgun sequence 144,244
NZ_NPML01000004.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_4, whole genome shotgun sequence 247,810
NZ_NPML01000005.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_5, whole genome shotgun sequence 7,476
NZ_NPML01000006.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_6, whole genome shotgun sequence 5,513
NZ_NPML01000007.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_7, whole genome shotgun sequence 474,732
NZ_NPML01000008.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_8, whole genome shotgun sequence 2,495
NZ_NPML01000009.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_9, whole genome shotgun sequence 2,930
NZ_NPML01000010.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_10, whole genome shotgun sequence 2,404
NZ_NPML01000011.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_11, whole genome shotgun sequence 260,763
NZ_NPML01000012.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_12, whole genome shotgun sequence 181,834
NZ_NPML01000013.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_13, whole genome shotgun sequence 419,522
NZ_NPML01000014.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_14, whole genome shotgun sequence 38,783
NZ_NPML01000015.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_15, whole genome shotgun sequence 4,075
NZ_NPML01000016.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_16, whole genome shotgun sequence 963
NZ_NPML01000017.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_17, whole genome shotgun sequence 13,604
NZ_NPML01000018.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_18, whole genome shotgun sequence 478,887
NZ_NPML01000019.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_1, whole genome shotgun sequence 639,631
NZ_NPML01000020.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_2, whole genome shotgun sequence 770
NZ_NPML01000021.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_3, whole genome shotgun sequence 397
NZ_NPML01000022.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_4, whole genome shotgun sequence 61,185
NZ_NPML01000023.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_5, whole genome shotgun sequence 4,245
NZ_NPML01000024.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_6, whole genome shotgun sequence 1,325
NZ_NPML01000025.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_7, whole genome shotgun sequence 41,684
NZ_NPML01000026.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold2_8, whole genome shotgun sequence 10,106
NZ_NPML01000027.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold3_1, whole genome shotgun sequence 133,895
NZ_NPML01000028.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold3_2, whole genome shotgun sequence 20,016
NZ_NPML01000029.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold3_3, whole genome shotgun sequence 323,101
NZ_NPML01000030.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold3_4, whole genome shotgun sequence 359
NZ_NPML01000031.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold3_5, whole genome shotgun sequence 64,823
NZ_NPML01000032.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold4_1, whole genome shotgun sequence 2,970
NZ_NPML01000033.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold4_2, whole genome shotgun sequence 623
NZ_NPML01000034.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold5_1, whole genome shotgun sequence 1,707
NZ_NPML01000035.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold6_1, whole genome shotgun sequence 909
NZ_NPML01000036.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold7_1, whole genome shotgun sequence 894
NZ_NPML01000037.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold8_1, whole genome shotgun sequence 868
NZ_NPML01000038.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold9_1, whole genome shotgun sequence 814
NZ_NPML01000039.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold10_1, whole genome shotgun sequence 740
NZ_NPML01000040.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold11_1, whole genome shotgun sequence 581
NZ_NPML01000041.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold12_1, whole genome shotgun sequence 512

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory