fast.genomicscompare 6,575 genera of bacteria & archaea

 

Helicobacter_J sp002272795 13S00482-2

Genome identifier: GCF_002272795.1

NCBI assembly name: ASM227279v1

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, Helicobacter_J, Helicobacter_J sp002272795

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter

Scaffolds: 108

Genes: 1,869 Protein-coding: 1,791 RNAs: 43 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MLAT01000001.1 Helicobacter sp. 13S00482-2 NODE_1_length_282368_cov_126.887_ID_1, whole genome shotgun sequence 282,368
NZ_MLAT01000002.1 Helicobacter sp. 13S00482-2 NODE_2_length_164499_cov_115.495_ID_3, whole genome shotgun sequence 164,499
NZ_MLAT01000003.1 Helicobacter sp. 13S00482-2 NODE_3_length_158201_cov_127.483_ID_5, whole genome shotgun sequence 158,201
NZ_MLAT01000004.1 Helicobacter sp. 13S00482-2 NODE_4_length_151142_cov_153.923_ID_7, whole genome shotgun sequence 151,142
NZ_MLAT01000005.1 Helicobacter sp. 13S00482-2 NODE_5_length_143536_cov_117.992_ID_9, whole genome shotgun sequence 143,536
NZ_MLAT01000006.1 Helicobacter sp. 13S00482-2 NODE_6_length_122505_cov_129.85_ID_11, whole genome shotgun sequence 122,505
NZ_MLAT01000007.1 Helicobacter sp. 13S00482-2 NODE_7_length_88364_cov_126.498_ID_13, whole genome shotgun sequence 88,364
NZ_MLAT01000008.1 Helicobacter sp. 13S00482-2 NODE_8_length_74558_cov_121.553_ID_15, whole genome shotgun sequence 74,558
NZ_MLAT01000009.1 Helicobacter sp. 13S00482-2 NODE_9_length_67697_cov_117.156_ID_17, whole genome shotgun sequence 67,697
NZ_MLAT01000010.1 Helicobacter sp. 13S00482-2 NODE_10_length_60478_cov_116.835_ID_19, whole genome shotgun sequence 60,478
NZ_MLAT01000011.1 Helicobacter sp. 13S00482-2 NODE_11_length_53964_cov_129.102_ID_21, whole genome shotgun sequence 53,964
NZ_MLAT01000012.1 Helicobacter sp. 13S00482-2 NODE_12_length_50269_cov_116.97_ID_23, whole genome shotgun sequence 50,269
NZ_MLAT01000013.1 Helicobacter sp. 13S00482-2 NODE_13_length_42519_cov_121.336_ID_25, whole genome shotgun sequence 42,519
NZ_MLAT01000014.1 Helicobacter sp. 13S00482-2 NODE_14_length_35719_cov_129.635_ID_27, whole genome shotgun sequence 35,719
NZ_MLAT01000015.1 Helicobacter sp. 13S00482-2 NODE_15_length_32427_cov_118.058_ID_29, whole genome shotgun sequence 32,427
NZ_MLAT01000016.1 Helicobacter sp. 13S00482-2 NODE_16_length_31277_cov_124.806_ID_31, whole genome shotgun sequence 31,277
NZ_MLAT01000017.1 Helicobacter sp. 13S00482-2 NODE_17_length_29136_cov_123.925_ID_33, whole genome shotgun sequence 29,136
NZ_MLAT01000018.1 Helicobacter sp. 13S00482-2 NODE_18_length_28079_cov_120.647_ID_35, whole genome shotgun sequence 28,079
NZ_MLAT01000019.1 Helicobacter sp. 13S00482-2 NODE_19_length_26924_cov_132.611_ID_37, whole genome shotgun sequence 26,924
NZ_MLAT01000020.1 Helicobacter sp. 13S00482-2 NODE_20_length_26885_cov_126.835_ID_39, whole genome shotgun sequence 26,885
NZ_MLAT01000021.1 Helicobacter sp. 13S00482-2 NODE_21_length_23563_cov_130.955_ID_41, whole genome shotgun sequence 23,563
NZ_MLAT01000022.1 Helicobacter sp. 13S00482-2 NODE_22_length_22044_cov_134.957_ID_43, whole genome shotgun sequence 22,044
NZ_MLAT01000023.1 Helicobacter sp. 13S00482-2 NODE_23_length_18523_cov_121.505_ID_45, whole genome shotgun sequence 18,523
NZ_MLAT01000024.1 Helicobacter sp. 13S00482-2 NODE_24_length_15940_cov_124.504_ID_47, whole genome shotgun sequence 15,940
NZ_MLAT01000025.1 Helicobacter sp. 13S00482-2 NODE_25_length_13844_cov_120.899_ID_49, whole genome shotgun sequence 13,844
NZ_MLAT01000026.1 Helicobacter sp. 13S00482-2 NODE_26_length_13700_cov_121.56_ID_51, whole genome shotgun sequence 13,700
NZ_MLAT01000027.1 Helicobacter sp. 13S00482-2 NODE_27_length_11883_cov_135.811_ID_53, whole genome shotgun sequence 11,883
NZ_MLAT01000028.1 Helicobacter sp. 13S00482-2 NODE_28_length_8775_cov_134.427_ID_55, whole genome shotgun sequence 8,775
NZ_MLAT01000029.1 Helicobacter sp. 13S00482-2 NODE_29_length_8471_cov_116.556_ID_57, whole genome shotgun sequence 8,471
NZ_MLAT01000030.1 Helicobacter sp. 13S00482-2 NODE_30_length_8275_cov_115.831_ID_59, whole genome shotgun sequence 8,275
NZ_MLAT01000031.1 Helicobacter sp. 13S00482-2 NODE_31_length_6753_cov_209.673_ID_61, whole genome shotgun sequence 6,753
NZ_MLAT01000032.1 Helicobacter sp. 13S00482-2 NODE_32_length_6429_cov_241.586_ID_63, whole genome shotgun sequence 6,429
NZ_MLAT01000033.1 Helicobacter sp. 13S00482-2 NODE_33_length_6418_cov_120.593_ID_65, whole genome shotgun sequence 6,418
NZ_MLAT01000034.1 Helicobacter sp. 13S00482-2 NODE_34_length_6135_cov_237.624_ID_67, whole genome shotgun sequence 6,135
NZ_MLAT01000035.1 Helicobacter sp. 13S00482-2 NODE_36_length_4815_cov_120.508_ID_71, whole genome shotgun sequence 4,815
NZ_MLAT01000036.1 Helicobacter sp. 13S00482-2 NODE_37_length_3160_cov_218.271_ID_73, whole genome shotgun sequence 3,160
NZ_MLAT01000037.1 Helicobacter sp. 13S00482-2 NODE_38_length_3063_cov_161.617_ID_75, whole genome shotgun sequence 3,063
NZ_MLAT01000038.1 Helicobacter sp. 13S00482-2 NODE_39_length_2988_cov_136.102_ID_77, whole genome shotgun sequence 2,988
NZ_MLAT01000039.1 Helicobacter sp. 13S00482-2 NODE_40_length_2734_cov_126.841_ID_79, whole genome shotgun sequence 2,734
NZ_MLAT01000040.1 Helicobacter sp. 13S00482-2 NODE_41_length_2117_cov_132.875_ID_81, whole genome shotgun sequence 2,117
NZ_MLAT01000041.1 Helicobacter sp. 13S00482-2 NODE_42_length_1957_cov_274.914_ID_83, whole genome shotgun sequence 1,957
NZ_MLAT01000042.1 Helicobacter sp. 13S00482-2 NODE_43_length_1943_cov_475.491_ID_85, whole genome shotgun sequence 1,943
NZ_MLAT01000043.1 Helicobacter sp. 13S00482-2 NODE_44_length_1885_cov_233.861_ID_87, whole genome shotgun sequence 1,885
NZ_MLAT01000044.1 Helicobacter sp. 13S00482-2 NODE_45_length_1870_cov_194.214_ID_89, whole genome shotgun sequence 1,870
NZ_MLAT01000045.1 Helicobacter sp. 13S00482-2 NODE_47_length_1413_cov_109.277_ID_93, whole genome shotgun sequence 1,413
NZ_MLAT01000046.1 Helicobacter sp. 13S00482-2 NODE_48_length_1297_cov_179.836_ID_95, whole genome shotgun sequence 1,297
NZ_MLAT01000047.1 Helicobacter sp. 13S00482-2 NODE_49_length_1291_cov_156.925_ID_97, whole genome shotgun sequence 1,291
NZ_MLAT01000048.1 Helicobacter sp. 13S00482-2 NODE_54_length_1157_cov_139.969_ID_107, whole genome shotgun sequence 1,157
NZ_MLAT01000049.1 Helicobacter sp. 13S00482-2 NODE_57_length_1068_cov_169.363_ID_113, whole genome shotgun sequence 1,068
NZ_MLAT01000050.1 Helicobacter sp. 13S00482-2 NODE_58_length_1052_cov_421.384_ID_115, whole genome shotgun sequence 1,052
NZ_MLAT01000051.1 Helicobacter sp. 13S00482-2 NODE_60_length_1023_cov_138.952_ID_119, whole genome shotgun sequence 1,023
NZ_MLAT01000052.1 Helicobacter sp. 13S00482-2 NODE_62_length_1004_cov_186.952_ID_123, whole genome shotgun sequence 1,004
NZ_MLAT01000053.1 Helicobacter sp. 13S00482-2 NODE_67_length_954_cov_355.773_ID_133, whole genome shotgun sequence 954
NZ_MLAT01000054.1 Helicobacter sp. 13S00482-2 NODE_68_length_954_cov_358.648_ID_135, whole genome shotgun sequence 954
NZ_MLAT01000055.1 Helicobacter sp. 13S00482-2 NODE_69_length_954_cov_359.705_ID_137, whole genome shotgun sequence 954
NZ_MLAT01000056.1 Helicobacter sp. 13S00482-2 NODE_70_length_953_cov_275.947_ID_139, whole genome shotgun sequence 953
NZ_MLAT01000057.1 Helicobacter sp. 13S00482-2 NODE_74_length_916_cov_240.507_ID_147, whole genome shotgun sequence 916
NZ_MLAT01000058.1 Helicobacter sp. 13S00482-2 NODE_89_length_847_cov_581.439_ID_177, whole genome shotgun sequence 847
NZ_MLAT01000059.1 Helicobacter sp. 13S00482-2 NODE_95_length_816_cov_300.711_ID_189, whole genome shotgun sequence 816
NZ_MLAT01000060.1 Helicobacter sp. 13S00482-2 NODE_98_length_803_cov_299.442_ID_195, whole genome shotgun sequence 803
NZ_MLAT01000061.1 Helicobacter sp. 13S00482-2 NODE_99_length_797_cov_126.481_ID_197, whole genome shotgun sequence 797
NZ_MLAT01000062.1 Helicobacter sp. 13S00482-2 NODE_102_length_787_cov_401.817_ID_203, whole genome shotgun sequence 787
NZ_MLAT01000063.1 Helicobacter sp. 13S00482-2 NODE_107_length_749_cov_325.182_ID_213, whole genome shotgun sequence 749
NZ_MLAT01000064.1 Helicobacter sp. 13S00482-2 NODE_112_length_738_cov_378.465_ID_223, whole genome shotgun sequence 738
NZ_MLAT01000065.1 Helicobacter sp. 13S00482-2 NODE_115_length_733_cov_122.873_ID_229, whole genome shotgun sequence 733
NZ_MLAT01000066.1 Helicobacter sp. 13S00482-2 NODE_118_length_728_cov_135.433_ID_235, whole genome shotgun sequence 728
NZ_MLAT01000067.1 Helicobacter sp. 13S00482-2 NODE_125_length_704_cov_84.799_ID_249, whole genome shotgun sequence 704
NZ_MLAT01000068.1 Helicobacter sp. 13S00482-2 NODE_132_length_684_cov_104.912_ID_263, whole genome shotgun sequence 684
NZ_MLAT01000069.1 Helicobacter sp. 13S00482-2 NODE_168_length_632_cov_310.226_ID_335, whole genome shotgun sequence 632
NZ_MLAT01000070.1 Helicobacter sp. 13S00482-2 NODE_171_length_630_cov_256.358_ID_341, whole genome shotgun sequence 630
NZ_MLAT01000071.1 Helicobacter sp. 13S00482-2 NODE_175_length_624_cov_112.801_ID_349, whole genome shotgun sequence 624
NZ_MLAT01000072.1 Helicobacter sp. 13S00482-2 NODE_184_length_615_cov_144.1_ID_367, whole genome shotgun sequence 615
NZ_MLAT01000073.1 Helicobacter sp. 13S00482-2 NODE_200_length_593_cov_84.5193_ID_399, whole genome shotgun sequence 593
NZ_MLAT01000074.1 Helicobacter sp. 13S00482-2 NODE_208_length_582_cov_217.519_ID_415, whole genome shotgun sequence 582
NZ_MLAT01000075.1 Helicobacter sp. 13S00482-2 NODE_209_length_581_cov_327.002_ID_417, whole genome shotgun sequence 581
NZ_MLAT01000076.1 Helicobacter sp. 13S00482-2 NODE_215_length_576_cov_130.804_ID_429, whole genome shotgun sequence 576
NZ_MLAT01000077.1 Helicobacter sp. 13S00482-2 NODE_217_length_573_cov_143.235_ID_433, whole genome shotgun sequence 573
NZ_MLAT01000078.1 Helicobacter sp. 13S00482-2 NODE_220_length_571_cov_289.779_ID_439, whole genome shotgun sequence 571
NZ_MLAT01000079.1 Helicobacter sp. 13S00482-2 NODE_230_length_564_cov_148.32_ID_459, whole genome shotgun sequence 564
NZ_MLAT01000080.1 Helicobacter sp. 13S00482-2 NODE_233_length_562_cov_296.894_ID_465, whole genome shotgun sequence 562
NZ_MLAT01000081.1 Helicobacter sp. 13S00482-2 NODE_237_length_559_cov_348.995_ID_473, whole genome shotgun sequence 559
NZ_MLAT01000082.1 Helicobacter sp. 13S00482-2 NODE_242_length_556_cov_263.399_ID_483, whole genome shotgun sequence 556
NZ_MLAT01000083.1 Helicobacter sp. 13S00482-2 NODE_267_length_533_cov_489.574_ID_533, whole genome shotgun sequence 533
NZ_MLAT01000084.1 Helicobacter sp. 13S00482-2 NODE_303_length_505_cov_211.347_ID_605, whole genome shotgun sequence 505
NZ_MLAT01000085.1 Helicobacter sp. 13S00482-2 NODE_315_length_499_cov_291.312_ID_629, whole genome shotgun sequence 499
NZ_MLAT01000086.1 Helicobacter sp. 13S00482-2 NODE_318_length_498_cov_120.706_ID_635, whole genome shotgun sequence 498
NZ_MLAT01000087.1 Helicobacter sp. 13S00482-2 NODE_350_length_478_cov_254.45_ID_699, whole genome shotgun sequence 478
NZ_MLAT01000088.1 Helicobacter sp. 13S00482-2 NODE_361_length_476_cov_91.4527_ID_721, whole genome shotgun sequence 476
NZ_MLAT01000089.1 Helicobacter sp. 13S00482-2 NODE_362_length_476_cov_202.387_ID_723, whole genome shotgun sequence 476
NZ_MLAT01000090.1 Helicobacter sp. 13S00482-2 NODE_367_length_474_cov_120.787_ID_733, whole genome shotgun sequence 474
NZ_MLAT01000091.1 Helicobacter sp. 13S00482-2 NODE_395_length_463_cov_309.408_ID_789, whole genome shotgun sequence 463
NZ_MLAT01000092.1 Helicobacter sp. 13S00482-2 NODE_465_length_445_cov_260.67_ID_929, whole genome shotgun sequence 445
NZ_MLAT01000093.1 Helicobacter sp. 13S00482-2 NODE_488_length_442_cov_114.819_ID_975, whole genome shotgun sequence 442
NZ_MLAT01000094.1 Helicobacter sp. 13S00482-2 NODE_502_length_439_cov_201.683_ID_1003, whole genome shotgun sequence 439
NZ_MLAT01000095.1 Helicobacter sp. 13S00482-2 NODE_798_length_385_cov_335.298_ID_1595, whole genome shotgun sequence 385
NZ_MLAT01000096.1 Helicobacter sp. 13S00482-2 NODE_838_length_369_cov_379.236_ID_1675, whole genome shotgun sequence 369
NZ_MLAT01000097.1 Helicobacter sp. 13S00482-2 NODE_839_length_358_cov_185.377_ID_1677, whole genome shotgun sequence 358
NZ_MLAT01000098.1 Helicobacter sp. 13S00482-2 NODE_840_length_356_cov_173.035_ID_1679, whole genome shotgun sequence 356
NZ_MLAT01000099.1 Helicobacter sp. 13S00482-2 NODE_841_length_355_cov_122.68_ID_1681, whole genome shotgun sequence 355
NZ_MLAT01000100.1 Helicobacter sp. 13S00482-2 NODE_842_length_312_cov_126.924_ID_1683, whole genome shotgun sequence 312
NZ_MLAT01000101.1 Helicobacter sp. 13S00482-2 NODE_843_length_302_cov_132_ID_1685, whole genome shotgun sequence 302
NZ_MLAT01000102.1 Helicobacter sp. 13S00482-2 NODE_844_length_297_cov_246.5_ID_1687, whole genome shotgun sequence 297
NZ_MLAT01000103.1 Helicobacter sp. 13S00482-2 NODE_845_length_290_cov_252.258_ID_1689, whole genome shotgun sequence 290
NZ_MLAT01000104.1 Helicobacter sp. 13S00482-2 NODE_846_length_288_cov_139.404_ID_1691, whole genome shotgun sequence 288
NZ_MLAT01000105.1 Helicobacter sp. 13S00482-2 NODE_847_length_276_cov_98.1275_ID_1693, whole genome shotgun sequence 276
NZ_MLAT01000106.1 Helicobacter sp. 13S00482-2 NODE_848_length_248_cov_251.496_ID_1695, whole genome shotgun sequence 248
NZ_MLAT01000107.1 Helicobacter sp. 13S00482-2 NODE_849_length_239_cov_326.491_ID_1697, whole genome shotgun sequence 239
NZ_MLAT01000108.1 Helicobacter sp. 13S00482-2 NODE_850_length_215_cov_223.364_ID_1699, whole genome shotgun sequence 215

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory