fast.genomicscompare 6,575 genera of bacteria & archaea

 

Helicobacter_I sp002272875 11S02629-2

Genome identifier: GCF_002272875.1

NCBI assembly name: ASM227287v1

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, Helicobacter_I, Helicobacter_I sp002272875

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter

Scaffolds: 61

Genes: 1,734 Protein-coding: 1,666 RNAs: 41 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_MLAN01000001.1 Helicobacter sp. 11S02629-2 NODE_1_length_326699_cov_98.9882_ID_1, whole genome shotgun sequence 326,699
NZ_MLAN01000002.1 Helicobacter sp. 11S02629-2 NODE_2_length_292418_cov_105.644_ID_3, whole genome shotgun sequence 292,418
NZ_MLAN01000003.1 Helicobacter sp. 11S02629-2 NODE_3_length_161985_cov_100.916_ID_5, whole genome shotgun sequence 161,985
NZ_MLAN01000004.1 Helicobacter sp. 11S02629-2 NODE_4_length_153386_cov_106.597_ID_7, whole genome shotgun sequence 153,386
NZ_MLAN01000005.1 Helicobacter sp. 11S02629-2 NODE_5_length_130868_cov_103.92_ID_9, whole genome shotgun sequence 130,868
NZ_MLAN01000006.1 Helicobacter sp. 11S02629-2 NODE_6_length_130372_cov_104.717_ID_11, whole genome shotgun sequence 130,372
NZ_MLAN01000007.1 Helicobacter sp. 11S02629-2 NODE_7_length_72925_cov_102.8_ID_13, whole genome shotgun sequence 72,925
NZ_MLAN01000008.1 Helicobacter sp. 11S02629-2 NODE_8_length_72850_cov_105.05_ID_15, whole genome shotgun sequence 72,850
NZ_MLAN01000009.1 Helicobacter sp. 11S02629-2 NODE_9_length_68842_cov_106.428_ID_17, whole genome shotgun sequence 68,842
NZ_MLAN01000010.1 Helicobacter sp. 11S02629-2 NODE_10_length_58861_cov_104.795_ID_19, whole genome shotgun sequence 58,861
NZ_MLAN01000011.1 Helicobacter sp. 11S02629-2 NODE_11_length_53694_cov_110.251_ID_21, whole genome shotgun sequence 53,694
NZ_MLAN01000012.1 Helicobacter sp. 11S02629-2 NODE_12_length_46596_cov_112.203_ID_23, whole genome shotgun sequence 46,596
NZ_MLAN01000013.1 Helicobacter sp. 11S02629-2 NODE_13_length_38309_cov_103.978_ID_25, whole genome shotgun sequence 38,309
NZ_MLAN01000014.1 Helicobacter sp. 11S02629-2 NODE_14_length_32014_cov_105.03_ID_27, whole genome shotgun sequence 32,014
NZ_MLAN01000015.1 Helicobacter sp. 11S02629-2 NODE_15_length_31981_cov_94.8371_ID_29, whole genome shotgun sequence 31,981
NZ_MLAN01000016.1 Helicobacter sp. 11S02629-2 NODE_16_length_24368_cov_120.473_ID_31, whole genome shotgun sequence 24,368
NZ_MLAN01000017.1 Helicobacter sp. 11S02629-2 NODE_17_length_24191_cov_105.452_ID_33, whole genome shotgun sequence 24,191
NZ_MLAN01000018.1 Helicobacter sp. 11S02629-2 NODE_18_length_20063_cov_105.708_ID_35, whole genome shotgun sequence 20,063
NZ_MLAN01000019.1 Helicobacter sp. 11S02629-2 NODE_19_length_16046_cov_105.197_ID_37, whole genome shotgun sequence 16,046
NZ_MLAN01000020.1 Helicobacter sp. 11S02629-2 NODE_20_length_14401_cov_104.175_ID_39, whole genome shotgun sequence 14,401
NZ_MLAN01000021.1 Helicobacter sp. 11S02629-2 NODE_21_length_13865_cov_136.434_ID_41, whole genome shotgun sequence 13,865
NZ_MLAN01000022.1 Helicobacter sp. 11S02629-2 NODE_22_length_10026_cov_99.5366_ID_43, whole genome shotgun sequence 10,026
NZ_MLAN01000023.1 Helicobacter sp. 11S02629-2 NODE_23_length_9963_cov_142.243_ID_45, whole genome shotgun sequence 9,963
NZ_MLAN01000024.1 Helicobacter sp. 11S02629-2 NODE_24_length_7225_cov_198.173_ID_47, whole genome shotgun sequence 7,225
NZ_MLAN01000025.1 Helicobacter sp. 11S02629-2 NODE_25_length_6921_cov_104.64_ID_49, whole genome shotgun sequence 6,921
NZ_MLAN01000026.1 Helicobacter sp. 11S02629-2 NODE_26_length_6088_cov_102.649_ID_51, whole genome shotgun sequence 6,088
NZ_MLAN01000027.1 Helicobacter sp. 11S02629-2 NODE_28_length_5282_cov_100.387_ID_55, whole genome shotgun sequence 5,282
NZ_MLAN01000028.1 Helicobacter sp. 11S02629-2 NODE_29_length_4931_cov_78.3924_ID_57, whole genome shotgun sequence 4,931
NZ_MLAN01000029.1 Helicobacter sp. 11S02629-2 NODE_30_length_4758_cov_99.0479_ID_59, whole genome shotgun sequence 4,758
NZ_MLAN01000030.1 Helicobacter sp. 11S02629-2 NODE_31_length_4592_cov_124.325_ID_61, whole genome shotgun sequence 4,592
NZ_MLAN01000031.1 Helicobacter sp. 11S02629-2 NODE_32_length_3263_cov_228.029_ID_63, whole genome shotgun sequence 3,263
NZ_MLAN01000032.1 Helicobacter sp. 11S02629-2 NODE_33_length_2981_cov_99.5385_ID_65, whole genome shotgun sequence 2,981
NZ_MLAN01000033.1 Helicobacter sp. 11S02629-2 NODE_34_length_2943_cov_92.2805_ID_67, whole genome shotgun sequence 2,943
NZ_MLAN01000034.1 Helicobacter sp. 11S02629-2 NODE_35_length_2220_cov_114.499_ID_69, whole genome shotgun sequence 2,220
NZ_MLAN01000035.1 Helicobacter sp. 11S02629-2 NODE_36_length_2000_cov_230.464_ID_71, whole genome shotgun sequence 2,000
NZ_MLAN01000036.1 Helicobacter sp. 11S02629-2 NODE_37_length_1690_cov_224.537_ID_73, whole genome shotgun sequence 1,690
NZ_MLAN01000037.1 Helicobacter sp. 11S02629-2 NODE_38_length_1477_cov_99.1904_ID_75, whole genome shotgun sequence 1,477
NZ_MLAN01000038.1 Helicobacter sp. 11S02629-2 NODE_39_length_1441_cov_201.034_ID_77, whole genome shotgun sequence 1,441
NZ_MLAN01000039.1 Helicobacter sp. 11S02629-2 NODE_40_length_1408_cov_196.084_ID_79, whole genome shotgun sequence 1,408
NZ_MLAN01000040.1 Helicobacter sp. 11S02629-2 NODE_41_length_1198_cov_121.556_ID_81, whole genome shotgun sequence 1,198
NZ_MLAN01000041.1 Helicobacter sp. 11S02629-2 NODE_42_length_1170_cov_208.306_ID_83, whole genome shotgun sequence 1,170
NZ_MLAN01000042.1 Helicobacter sp. 11S02629-2 NODE_43_length_1092_cov_196.418_ID_85, whole genome shotgun sequence 1,092
NZ_MLAN01000043.1 Helicobacter sp. 11S02629-2 NODE_44_length_1065_cov_228.017_ID_87, whole genome shotgun sequence 1,065
NZ_MLAN01000044.1 Helicobacter sp. 11S02629-2 NODE_45_length_991_cov_96.713_ID_89, whole genome shotgun sequence 991
NZ_MLAN01000045.1 Helicobacter sp. 11S02629-2 NODE_46_length_950_cov_252.294_ID_91, whole genome shotgun sequence 950
NZ_MLAN01000046.1 Helicobacter sp. 11S02629-2 NODE_48_length_873_cov_71.6367_ID_95, whole genome shotgun sequence 873
NZ_MLAN01000047.1 Helicobacter sp. 11S02629-2 NODE_51_length_784_cov_111.644_ID_101, whole genome shotgun sequence 784
NZ_MLAN01000048.1 Helicobacter sp. 11S02629-2 NODE_53_length_762_cov_133.584_ID_105, whole genome shotgun sequence 762
NZ_MLAN01000049.1 Helicobacter sp. 11S02629-2 NODE_55_length_738_cov_354.257_ID_109, whole genome shotgun sequence 738
NZ_MLAN01000050.1 Helicobacter sp. 11S02629-2 NODE_56_length_734_cov_195.157_ID_111, whole genome shotgun sequence 734
NZ_MLAN01000051.1 Helicobacter sp. 11S02629-2 NODE_63_length_653_cov_147.097_ID_125, whole genome shotgun sequence 653
NZ_MLAN01000052.1 Helicobacter sp. 11S02629-2 NODE_72_length_600_cov_234.427_ID_143, whole genome shotgun sequence 600
NZ_MLAN01000053.1 Helicobacter sp. 11S02629-2 NODE_98_length_512_cov_123.4_ID_195, whole genome shotgun sequence 512
NZ_MLAN01000054.1 Helicobacter sp. 11S02629-2 NODE_169_length_433_cov_503.569_ID_337, whole genome shotgun sequence 433
NZ_MLAN01000055.1 Helicobacter sp. 11S02629-2 NODE_220_length_419_cov_1355.57_ID_439, whole genome shotgun sequence 419
NZ_MLAN01000056.1 Helicobacter sp. 11S02629-2 NODE_230_length_417_cov_590.928_ID_459, whole genome shotgun sequence 417
NZ_MLAN01000057.1 Helicobacter sp. 11S02629-2 NODE_302_length_394_cov_101.004_ID_603, whole genome shotgun sequence 394
NZ_MLAN01000058.1 Helicobacter sp. 11S02629-2 NODE_358_length_351_cov_105.009_ID_715, whole genome shotgun sequence 351
NZ_MLAN01000059.1 Helicobacter sp. 11S02629-2 NODE_359_length_276_cov_116.161_ID_717, whole genome shotgun sequence 276
NZ_MLAN01000060.1 Helicobacter sp. 11S02629-2 NODE_360_length_260_cov_87.6692_ID_719, whole genome shotgun sequence 260
NZ_MLAN01000061.1 Helicobacter sp. 11S02629-2 NODE_361_length_220_cov_87.7419_ID_721, whole genome shotgun sequence 220

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory