fast.genomicscompare 6,575 genera of bacteria & archaea

 

Actibacterium_B pelagium JN33

Genome identifier: GCF_002285415.1

NCBI assembly name: ASM228541v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Actibacterium_B, Actibacterium_B pelagium

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Actibacterium, Actibacterium pelagium

Scaffolds: 7

Genes: 3,424 Protein-coding: 3,343 RNAs: 73 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NSBU01000001.1 Actibacterium pelagium strain JN33 JN33_S1_15754bp, whole genome shotgun sequence 15,754
NZ_NSBU01000002.1 Actibacterium pelagium strain JN33 JN33_S2_18813bp, whole genome shotgun sequence 18,813
NZ_NSBU01000003.1 Actibacterium pelagium strain JN33 JN33_S3_27952bp, whole genome shotgun sequence 27,952
NZ_NSBU01000004.1 Actibacterium pelagium strain JN33 JN33_S4_979015bp, whole genome shotgun sequence 979,015
NZ_NSBU01000005.1 Actibacterium pelagium strain JN33 JN33_S5_401571bp, whole genome shotgun sequence 401,571
NZ_NSBU01000006.1 Actibacterium pelagium strain JN33 JN33_S6_427991bp, whole genome shotgun sequence 427,991
NZ_NSBU01000007.1 Actibacterium pelagium strain JN33 JN33_S7_1623386bp, whole genome shotgun sequence 1,623,386

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory