fast.genomicscompare 6,575 genera of bacteria & archaea

 

Helicobacter_F sp002287135 TUL

Genome identifier: GCF_002287135.1

NCBI assembly name: ASM228713v1

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, Helicobacter_F, Helicobacter_F sp002287135

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter

Scaffolds: 43

Genes: 1,762 Protein-coding: 1,684 RNAs: 43 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NESU01000001.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig01, whole genome shotgun sequence 214,427
NZ_NESU01000002.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig02, whole genome shotgun sequence 205,777
NZ_NESU01000003.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig03, whole genome shotgun sequence 130,467
NZ_NESU01000004.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig04, whole genome shotgun sequence 111,685
NZ_NESU01000005.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig05, whole genome shotgun sequence 109,793
NZ_NESU01000006.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig06, whole genome shotgun sequence 102,565
NZ_NESU01000007.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig07, whole genome shotgun sequence 98,808
NZ_NESU01000008.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig08, whole genome shotgun sequence 72,305
NZ_NESU01000009.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig09, whole genome shotgun sequence 70,715
NZ_NESU01000010.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig010, whole genome shotgun sequence 68,601
NZ_NESU01000011.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig011, whole genome shotgun sequence 62,246
NZ_NESU01000012.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig012, whole genome shotgun sequence 55,925
NZ_NESU01000013.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig013, whole genome shotgun sequence 57,065
NZ_NESU01000014.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig014, whole genome shotgun sequence 51,541
NZ_NESU01000015.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig015, whole genome shotgun sequence 47,190
NZ_NESU01000016.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig016, whole genome shotgun sequence 31,855
NZ_NESU01000017.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig017, whole genome shotgun sequence 27,726
NZ_NESU01000018.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig018, whole genome shotgun sequence 26,316
NZ_NESU01000019.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig019, whole genome shotgun sequence 25,284
NZ_NESU01000020.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig020, whole genome shotgun sequence 23,463
NZ_NESU01000021.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig021, whole genome shotgun sequence 21,537
NZ_NESU01000022.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig022, whole genome shotgun sequence 19,739
NZ_NESU01000023.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig023, whole genome shotgun sequence 18,903
NZ_NESU01000024.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig024, whole genome shotgun sequence 10,097
NZ_NESU01000025.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig025, whole genome shotgun sequence 9,489
NZ_NESU01000026.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig026, whole genome shotgun sequence 6,761
NZ_NESU01000027.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig027, whole genome shotgun sequence 7,228
NZ_NESU01000028.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig028, whole genome shotgun sequence 2,584
NZ_NESU01000029.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig029, whole genome shotgun sequence 2,311
NZ_NESU01000030.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig030, whole genome shotgun sequence 2,168
NZ_NESU01000031.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig031, whole genome shotgun sequence 1,679
NZ_NESU01000032.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig032, whole genome shotgun sequence 1,538
NZ_NESU01000033.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig033, whole genome shotgun sequence 1,296
NZ_NESU01000034.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig034, whole genome shotgun sequence 1,200
NZ_NESU01000035.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig035, whole genome shotgun sequence 1,176
NZ_NESU01000036.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig036, whole genome shotgun sequence 1,148
NZ_NESU01000037.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig037, whole genome shotgun sequence 1,136
NZ_NESU01000038.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig038, whole genome shotgun sequence 1,032
NZ_NESU01000039.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig039, whole genome shotgun sequence 1,018
NZ_NESU01000040.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig040, whole genome shotgun sequence 806
NZ_NESU01000041.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig041, whole genome shotgun sequence 542
NZ_NESU01000042.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig042, whole genome shotgun sequence 552
NZ_NESU01000043.1 Helicobacter sp. TUL H.caesarodunum_S15_Contig043, whole genome shotgun sequence 571

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory