fast.genomicscompare 6,575 genera of bacteria & archaea

 

Endomicrobium_A trichonymphae Rs-D17

Genome identifier: GCF_002355835.1

NCBI assembly name: ASM235583v1

GTDB taxonomy: Bacteria, Elusimicrobiota, Endomicrobiia, Endomicrobiales, Endomicrobiaceae, Endomicrobium_A, Endomicrobium_A trichonymphae

NCBI taxonomy: Bacteria, Elusimicrobiota, Endomicrobiia, Endomicrobiales, Endomicrobiaceae, Endomicrobium, Candidatus Endomicrobium trichonymphae

Scaffolds: 4

Genes: 1,183 Protein-coding: 1,121 RNAs: 50 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AP017459.1 Candidatus Endomicrobium trichonymphae strain Rs-D17 chromosome, complete genome 1,114,532
NZ_AP017460.1 Candidatus Endomicrobium trichonymphae strain Rs-D1 plasmid pRSTT1, complete sequence 5,518
NZ_AP017461.1 Candidatus Endomicrobium trichonymphae strain Rs-D17 plasmid pRSTT2, complete sequence 5,752
NZ_AP017462.1 Candidatus Endomicrobium trichonymphae strain Rs-D17 plasmid pRSTT3, complete sequence 5,038

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory