fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudothioclava arenosa CAU 1312

Genome identifier: GCF_002358085.1

NCBI assembly name: ASM235808v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudothioclava, Pseudothioclava arenosa

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pseudothioclava, Pseudothioclava arenosa

Scaffolds: 25

Genes: 2,789 Protein-coding: 2,703 RNAs: 54 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NTJD01000001.1 Pseudothioclava arenosa strain CAU 1312 contig1, whole genome shotgun sequence 459,751
NZ_NTJD01000002.1 Pseudothioclava arenosa strain CAU 1312 contig2, whole genome shotgun sequence 404,386
NZ_NTJD01000003.1 Pseudothioclava arenosa strain CAU 1312 contig3, whole genome shotgun sequence 383,995
NZ_NTJD01000004.1 Pseudothioclava arenosa strain CAU 1312 contig4, whole genome shotgun sequence 307,761
NZ_NTJD01000005.1 Pseudothioclava arenosa strain CAU 1312 contig5, whole genome shotgun sequence 222,679
NZ_NTJD01000006.1 Pseudothioclava arenosa strain CAU 1312 contig6, whole genome shotgun sequence 196,725
NZ_NTJD01000007.1 Pseudothioclava arenosa strain CAU 1312 contig7, whole genome shotgun sequence 175,581
NZ_NTJD01000008.1 Pseudothioclava arenosa strain CAU 1312 contig8, whole genome shotgun sequence 166,989
NZ_NTJD01000009.1 Pseudothioclava arenosa strain CAU 1312 contig9, whole genome shotgun sequence 156,733
NZ_NTJD01000010.1 Pseudothioclava arenosa strain CAU 1312 contig10, whole genome shotgun sequence 100,955
NZ_NTJD01000011.1 Pseudothioclava arenosa strain CAU 1312 contig11, whole genome shotgun sequence 70,677
NZ_NTJD01000012.1 Pseudothioclava arenosa strain CAU 1312 contig12, whole genome shotgun sequence 37,475
NZ_NTJD01000013.1 Pseudothioclava arenosa strain CAU 1312 contig13, whole genome shotgun sequence 34,323
NZ_NTJD01000014.1 Pseudothioclava arenosa strain CAU 1312 contig14, whole genome shotgun sequence 18,212
NZ_NTJD01000015.1 Pseudothioclava arenosa strain CAU 1312 contig15, whole genome shotgun sequence 13,354
NZ_NTJD01000016.1 Pseudothioclava arenosa strain CAU 1312 contig16, whole genome shotgun sequence 11,774
NZ_NTJD01000017.1 Pseudothioclava arenosa strain CAU 1312 contig17, whole genome shotgun sequence 8,569
NZ_NTJD01000018.1 Pseudothioclava arenosa strain CAU 1312 contig18, whole genome shotgun sequence 6,522
NZ_NTJD01000019.1 Pseudothioclava arenosa strain CAU 1312 contig19, whole genome shotgun sequence 5,413
NZ_NTJD01000020.1 Pseudothioclava arenosa strain CAU 1312 contig20, whole genome shotgun sequence 4,230
NZ_NTJD01000021.1 Pseudothioclava arenosa strain CAU 1312 contig21, whole genome shotgun sequence 2,102
NZ_NTJD01000022.1 Pseudothioclava arenosa strain CAU 1312 contig22, whole genome shotgun sequence 1,662
NZ_NTJD01000023.1 Pseudothioclava arenosa strain CAU 1312 contig23, whole genome shotgun sequence 1,635
NZ_NTJD01000024.1 Pseudothioclava arenosa strain CAU 1312 contig24, whole genome shotgun sequence 1,073
NZ_NTJD01000025.1 Pseudothioclava arenosa strain CAU 1312 contig25, whole genome shotgun sequence 1,053

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory