fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pacificitalea manganoxidans DY25

Genome identifier: GCF_002504165.1

NCBI assembly name: ASM250416v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pacificitalea, Pacificitalea manganoxidans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pacificitalea, Pacificitalea manganoxidans

Scaffolds: 8

Genes: 3,656 Protein-coding: 3,554 RNAs: 57 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP021404.1 Pacificitalea manganoxidans strain DY25 chromosome, complete genome 3,308,769
NZ_CP021405.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-A, complete sequence 174,678
NZ_CP021406.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-B, complete sequence 178,640
NZ_CP021407.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-C, complete sequence 112,508
NZ_CP021408.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-D, complete sequence 55,280
NZ_CP021409.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-E, complete sequence 68,016
NZ_CP021410.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-F, complete sequence 42,252
NZ_CP021411.1 Pacificitalea manganoxidans strain DY25 plasmid pDY25-G, complete sequence 16,653

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory